H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID:
HIX0013455
Created date:
26-Mar-2013
Last modified:
20-Apr-2012
Definition:
E3 ubiquitin-protein ligase RNF167 precursor.
Select format
Flat file
XML file
Gene structure
H-Inv cluster ID
HIX0013455
Genomic location
Chromosome
17
Location
17p13.2
Position
4843303- 4848517
Strand
+
Antisense cluster ID(s)
HIX0013454
overlap at CDSs (all)
Database links
RefSeq
NM_015528
;
Ensembl
ENST00000262482
;
Entrez Gene
Entrez Gene ID:26001
;
KEGG GENES
KEGG GENES(26001)
;
GeneCard
RNF167
;
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Cluster member H-Inv ID(s)
HIT000296195
;
HIT000008603
;
HIT000034827
;
HIT000029014
;
HIT000272638
;
HIT000283588
;
HIT000276074
;
HIT000274859
;
HIT000272836
;
HIT000285878
;
HIT000296408
;
HIT000292668
;
HIT000286382
;
HIT000295427
;
HIT000088055
;
HIT000290947
;
HIT000280708
;
HIT000290423
;
HIT000270034
;
HIT000271435
;
HIT000268190
;
HIT000283906
;
HIT000250989
;
HIT000250100
;
HIT000333357
;
HIT000250140
;
Additional cluster member candidate(s)
NA
Related H-InvDB links
H-DBAS
;
G-integra
;
cDNA-genome multiple alignment
;
ORF multiple alignment
;
TOP
1-10
11-20
21-26
LAST
Cluster member (s)
Locus member number
1
H-Inv ID
HIT000296195
Accession number
CR617000.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
Representative transcript;
Splicing isoform
Genomic location
Chromosome
17
Location
17p13.2
Position
4843303- 4848486
Strand
+
Gene structure
11 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
2
H-Inv ID
HIT000008603
Accession number
AK025329.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
Splicing isoform
Genomic location
Chromosome
17
Location
17p13.2
Position
4843630- 4848516
Strand
+
Gene structure
10 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
3
H-Inv ID
HIT000034827
Accession number
BC010139.2
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4844031- 4848516
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
4
H-Inv ID
HIT000029014
Accession number
AL834284.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167; EC=6.3.2.-; RING finger protein 167; RING105; Precursor;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
Q9H6Y7
) [Identity/coverage = 99.714%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843907- 4848514
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
5
H-Inv ID
HIT000272638
Accession number
CR593443.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843387- 4848486
Strand
+
Gene structure
11 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
6
H-Inv ID
HIT000283588
Accession number
CR604393.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843415- 4848465
Strand
+
Gene structure
11 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
7
H-Inv ID
HIT000276074
Accession number
CR596879.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843780- 4848486
Strand
+
Gene structure
10 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
8
H-Inv ID
HIT000274859
Accession number
CR595664.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843676- 4848486
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
9
H-Inv ID
HIT000272836
Accession number
CR593641.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843781- 4848497
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
10
H-Inv ID
HIT000285878
Accession number
CR606683.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843913- 4848514
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
11
H-Inv ID
HIT000296408
Accession number
CR617213.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843933- 4848500
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
12
H-Inv ID
HIT000292668
Accession number
CR613473.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843913- 4848479
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
13
H-Inv ID
HIT000286382
Accession number
CR607187.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843926- 4848482
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
14
H-Inv ID
HIT000295427
Accession number
CR616232.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843961- 4848517
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
15
H-Inv ID
HIT000088055
Accession number
BC013222.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843976- 4848516
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
16
H-Inv ID
HIT000290947
Accession number
CR611752.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843937- 4848473
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
17
H-Inv ID
HIT000280708
Accession number
CR601513.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843913- 4848445
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
18
H-Inv ID
HIT000290423
Accession number
CR611228.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843930- 4848442
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
19
H-Inv ID
HIT000270034
Accession number
CR590839.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843966- 4848468
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
20
H-Inv ID
HIT000271435
Accession number
CR592240.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843960- 4848428
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
21
H-Inv ID
HIT000268190
Accession number
CR457340.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4844205- 4848311
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
22
H-Inv ID
HIT000283906
Accession number
CR604711.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167; EC=6.3.2.-; RING finger protein 167; RING105; Precursor;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
Q9H6Y7
) [Identity/coverage = 98.857%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843782- 4848467
Strand
+
Gene structure
10 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
23
H-Inv ID
HIT000250989
Accession number
AY203930.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167; EC=6.3.2.-; RING finger protein 167; RING105; Precursor;
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
Q9H6Y7
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4843929- 4848511
Strand
+
Gene structure
9 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
24
H-Inv ID
HIT000250100
Accession number
AL050060.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to E3 ubiquitin-protein ligase RNF167; EC=6.3.2.-; RING finger protein 167; RING105; Precursor;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
Q9H6Y7
) [Identity/coverage = 100.0%/92.86%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4844371- 4848514
Strand
+
Gene structure
8 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
25
H-Inv ID
HIT000333357
Accession number
AY960626.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to E3 ubiquitin-protein ligase RNF167; EC=6.3.2.-; RING finger protein 167; RING105; Precursor;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
Q9H6Y7
) [Identity/coverage = 96.479%/40.57%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
Splicing isoform
Genomic location
Chromosome
17
Location
17p13.2
Position
4844371- 4846333
Strand
+
Gene structure
4 exons
TOP
1-10
11-20
21-26
LAST
Locus member number
26
H-Inv ID
HIT000250140
Accession number
AL079315.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
Similar to E3 ubiquitin-protein ligase RNF167; EC=6.3.2.-; RING finger protein 167; RING105; Precursor;
Similarity category
Category: Similar to known protein(Category II).
Similar to known protein (
Q9H6Y7
) [Identity/coverage = 97.71%/37.43%] to Homo sapiens (Human). protein.
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Transcript feature
NA
Genomic location
Chromosome
17
Location
17p13.2
Position
4847852- 4848516
Strand
+
Gene structure
1 exons
Alternative splicing (AS) information
Pattern of alternative splicing isoforms
5' terminal AS; 3' terminal AS; Internal AS;
Position of alternative splicing isoforms
Internal donor site; Retained intron;
Alternative splicing isoform H-Inv ID(s)
HIT000008603
;
HIT000296195
;
HIT000333357
;
Related H-InvDB links
H-DBAS
;
G-integra
;
cDNA-genome multiple alignment
;
ORF multiple alignment
;
Gene function information
H-Inv cluster ID
HIX0013455
Representative H-Inv ID
HIT000296195
Accession number
CR617000.1
CAGE tag ID
NA
EST ID
NA
Coding potential
Protein coding;
Definition
E3 ubiquitin-protein ligase RNF167 precursor.
Similarity category
Category: Identical to known human protein(Category I).
Identical to known human protein (
NP_056343
) [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene family/group
H-Inv gene family/group ID
HIF0001418
Gene family/group name
Zinc finger, C3HC4 RING-type (IPR018957).
Evidence motif (InterPro) ID
IPR018957
Gene symbol/name
HGNC symbol
RNF167
HGNC aliases
NA
HGNC name
ring finger protein 167
Protein-protein interaction (PPI)
H-Inv protein ID
HIP000062894
No. of interaction
1
Interaction partner(s)
HIP000255836
;
BIND
NA
DIP
NA
MINT
NA
HPRD
NA
IntAct
NA
Database links
RefSeq
NM_015528
;
Ensembl
ENST00000262482
;
Entrez Gene
Entrez Gene ID:26001
;
KEGG GENES
KEGG GENES(26001)
;
GeneCard
RNF167
;
*GeneCards is provided free to academic non-profit institutions.
etc
Human-Gene diversity Of Life-style related Diseases
;
Related H-InvDB links
G-integra
;
PPI view
;
H-DBAS
; Zinc finger, C3HC4 RING-type (IPR018957).
Similarity search tool
;
TACT
;
Gene expression information
Last modified:20-Apr-2012
Tissue-specific expression
NA
Probe
information
AceGene
AGhsB070222;
Affymetrix
GeneChip
HG-Focus
NA
HG-U133
212047_s_at;
HG-U133A
212047_s_at;
HG-U133A_2
212047_s_at;
HG-U133B
NA
HG-U133_Plus_2
212047_s_at;
HG-U95
35840_at; 74756_at; 74758_at;
HG-U95A
35840_at;
HG-U95B
NA
HG-U95C
NA
HG-U95D
74756_at; 74758_at;
HG-U95E
NA
HG-U95Av2
NA
HuEx-1_0
3707353; 3707356; 3707357; 3707359; 3707360; 3707362; 3707363; 3707364; 3707366; 3707368; 3707372; 3707375; 3707376; 3707377; 3707378; 3707379; 3742377; 3742399;
HuGeneFL
NA
Agilent
Human 1A Oligo Microarray:PGID215
A_23_P141536;
Whole Human Genome Oligo Microarray:PGID247
A_24_P344295; A_24_P76911;
Related H-InvDB links
H-ANGEL
;
DNAProbeLocator
;
Disease/pathology information
Last modified:20-Apr-2012
Disease relation
Disease name:NA
Related information in OMIM
OMIM ID:NA Title:NA
Co-localized orphan diseases
OMIM ID:
215500
;
601202
;
605779
;
605809
;
606545
;
608631
;
610185
;
611302
;
612576
;
Disease related mutation
NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA)
Gene name
Entrez Gene ID:(26001);
Disease
Entrez Gene ID:(26001);
Gene function
Entrez Gene ID:(26001);
Substance
Entrez Gene ID:(26001);
Related H-InvDB links
DiseaseInfo Viewer
;
LEGENDA
;