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H-Inv cluster ID: HIX0012114 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Conserved hypothetical protein.

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Gene structure

H-Inv cluster ID		HIX0012114
Genomic location	Chromosome	15
	Location	15q14
	Position	38988799- 38992239
	Strand	+
Antisense cluster ID(s)		NA
Database links	RefSeq	NM_207444;
	Ensembl	ENST00000318792;
	Entrez Gene	Entrez Gene ID:400359;
	KEGG GENES	KEGG GENES(400359);
	GeneCard	C15orf53;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Cluster member H-Inv ID(s)		HIT000017881;  HIT000388112;  HIT000387939;
Additional cluster member candidate(s)		NA
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

 

TOP 1-3 LAST

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000017881
Accession number		AK093014.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Conserved hypothetical protein.
Similarity category		Category: Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Gene symbol/name	HGNC symbol	C15orf53
	HGNC aliases	NA
	HGNC name	chromosome 15 open reading frame 53
Transcript feature		Representative transcript;
Genomic location	Chromosome	15
	Location	15q14
	Position	38988799- 38992239
	Strand	+
Gene structure		2 exons

 

TOP 1-3 LAST

Locus member number		2
H-Inv ID		HIT000388112
Accession number		BC119810.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Conserved hypothetical protein.
Similarity category		Category: Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Gene symbol/name	HGNC symbol	C15orf53
	HGNC aliases	NA
	HGNC name	chromosome 15 open reading frame 53
Transcript feature		NA
Genomic location	Chromosome	15
	Location	15q14
	Position	38988799- 38990851
	Strand	+
Gene structure		2 exons

 

TOP 1-3 LAST

Locus member number		3
H-Inv ID		HIT000387939
Accession number		BC119016.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Conserved hypothetical protein.
Similarity category		Category: Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Gene symbol/name	HGNC symbol	C15orf53
	HGNC aliases	NA
	HGNC name	chromosome 15 open reading frame 53
Transcript feature		NA
Genomic location	Chromosome	15
	Location	15q14
	Position	38988799- 38990844
	Strand	+
Gene structure		2 exons

Gene function information

H-Inv cluster ID		HIX0012114
Representative H-Inv ID		HIT000017881
Accession number		AK093014.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Conserved hypothetical protein.
Similarity category		Category: Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	C15orf53
	HGNC aliases	NA
	HGNC name	chromosome 15 open reading frame 53
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000048051
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NM_207444;
	Ensembl	ENST00000318792;
	Entrez Gene	Entrez Gene ID:400359;
	KEGG GENES	KEGG GENES(400359);
	GeneCard	C15orf53;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Related H-InvDB links		G-integra;  PPI view;  H-DBAS;  Gene family;  Similarity search tool;  TACT;

Gene expression information

Last modified:20-Apr-2012

Tissue-specific expression			NA
Probe information	AceGene		NA
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	NA
		HG-U133A	NA
		HG-U133A_2	NA
		HG-U133B	NA
		HG-U133_Plus_2	NA
		HG-U95	NA
		HG-U95A	NA
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	3589291;  3589292;  3589293;  3618822;  3618823;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	NA
		Whole Human Genome Oligo Microarray:PGID247	NA
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:20-Apr-2012

Disease relation			Disease name:NA
Related information in OMIM			OMIM ID:NA Title:NA
Co-localized orphan diseases			OMIM ID:  117100;  122460;  214900;  601228;  604329;  604827;  605738;  608646;  609273;
Disease related mutation			NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA)	Gene name	Entrez Gene ID:(400359);
	Disease	Entrez Gene ID:(400359);
	Gene function	Entrez Gene ID:(400359);
	Substance	Entrez Gene ID:(400359);
Related H-InvDB links			DiseaseInfo Viewer;  LEGENDA;