H-InvDB x AHG DB
Locus view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0011162 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: Similar to Exportin-4.
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0011162
Genomic location  G-integra Help Chromosome 13
Location 13q12.11
Position 21351468- 21477187
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:64328
KEGG GENES KEGG GENES(64328)
GeneCard GeneCardXPO4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000001437HIT000014531HIT000006382HIT000056490HIT000026731HIT000387026HIT000387024HIT000097259HIT000335956HIT000099256HIT000497384
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-10 11-11 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000001437
Accession number AB051508.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 100.0%/99.91%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21353269- 21476876
Strand -
Gene structure 23 exons
 
TOP 1-10 11-11 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000014531
Accession number AK057924.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21357842- 21476884
Strand -
Gene structure 23 exons
 
TOP 1-10 11-11 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000006382
Accession number AK023108.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 99.877%/70.81%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21357847- 21396007
Strand -
Gene structure 15 exons
 
TOP 1-10 11-11 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000056490
Accession number BX647843.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 99.866%/64.64%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21353262- 21384059
Strand -
Gene structure 14 exons
 
TOP 1-10 11-11 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000026731
Accession number AL831819.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 100.0%/22.94%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21353018- 21370350
Strand -
Gene structure 6 exons
 
TOP 1-10 11-11 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000387026
Accession number BC113573.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 99.823%/98.18%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21357804- 21442848
Strand -
Gene structure 22 exons
 
TOP 1-10 11-11 LAST 
Locus member number 7
H-Inv ID Transcript viewHIT000387024
Accession number BC113571.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 99.823%/98.18%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21357813- 21442848
Strand -
Gene structure 22 exons
 
TOP 1-10 11-11 LAST 
Locus member number 8
H-Inv ID Transcript viewHIT000097259
Accession number BC042504.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 100.0%/87.58%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21357847- 21429793
Strand -
Gene structure 20 exons
 
TOP 1-10 11-11 LAST 
Locus member number 9
H-Inv ID Transcript viewHIT000335956
Accession number BC098402.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 99.636%/47.78%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21362211- 21476885
Strand -
Gene structure 18 exons
 
TOP 1-10 11-11 LAST 
Locus member number 10
H-Inv ID Transcript viewHIT000099256
Accession number BC050680.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 98.786%/71.59%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21364624- 21476850
Strand -
Gene structure 16 exons
 
TOP 1-10 11-11 LAST 
Locus member number 11
H-Inv ID Transcript viewHIT000497384
Accession number AK302760.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 100.0%/14.94%] to Homo sapiens protein.
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Transcript feature NA
Genomic location  G-integra Chromosome 13
Location 13q12.11
Position 21395900- 21476891
Strand -
Gene structure 8 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 5' terminal AS;  3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms Cassette;  Retained intron; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000387026Splicing isoformHIT000001437Splicing isoformHIT000335956
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0011162
Representative H-Inv ID Representative H-Inv IDHIT000001437
Accession number AB051508.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Exportin-4.
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (NP_071904)  [Identity/coverage = 100.0%/99.91%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol XPO4 
HGNC aliases NA
HGNC name exportin 4 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000021556
No. of interaction 5
Interaction partner(s) HIP000081634HIP000102042HIP000112927HIP000146236HIP000420501
BIND NA
DIP 113027E;  113995E;  115686E; 
MINT NA
HPRD 02555;  03109;  06115; 
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:64328
KEGG GENES KEGG GENES(64328)
GeneCard GeneCardXPO4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA070804; 
Affymetrix
GeneChip
HG-Focus 218479_s_at; 
HG-U133 218479_s_at;  222649_at; 
HG-U133A 218479_s_at; 
HG-U133A_2 218479_s_at; 
HG-U133B 222649_at; 
HG-U133_Plus_2 218479_s_at;  222649_at; 
HG-U95 48741_at;  75909_at;  85581_at; 
HG-U95A NA
HG-U95B NA
HG-U95C 48741_at; 
HG-U95D 75909_at;  85581_at; 
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3480551;  3480553;  3480554;  3480556;  3480557;  3480559;  3504436;  3504437;  3504438;  3504439;  3504440;  3504441;  3504444;  3504445;  3504446;  3504448;  3504451;  3504452;  3504453;  3504454;  3504455;  3504457;  3504458;  3504459;  3504460;  3504461;  3504462;  3504463;  3504466;  3504471;  3504473;  3504476;  3504480;  3504483;  3504487; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P139983; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P139983;  A_24_P333716; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator