H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

Home Quick guide Navi BLAST Site map Download Contact us Help

Transcript view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS

H-Inv cluster ID: HIX0008316 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Collagen alpha-1(XXVII) chain preproprotein.

		Select format Flat file XML file

Cluster annotation summary

H-Inv cluster ID		HIX0008316
Genomic location	Chromosome	9
	Location	9q32
	Position	116917840- 117074791
	Strand	+
Representative H-Inv ID		HIT000084768
Coding potential		Protein coding;
Definition		Collagen alpha-1(XXVII) chain preproprotein.
Similarity category		Category:  Identical to known human protein(Category I).
		Identical to known human protein (NP_116277)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene family / group		Putative Collagen triple helix repeat (IPR008160).
Gene symbol/name	HGNC symbol	COL27A1
	HGNC aliases	NA
	HGNC name	collagen, type XXVII, alpha 1
Database links	RefSeq	NM_032888;
	Ensembl	ENST00000485397;  ENST00000494090;  ENST00000490831;  ENST00000356083;  ENST00000494780;  ENST00000357257;  ENST00000374106;  ENST00000468565;  ENST00000451716;
	Entrez Gene	Entrez Gene ID:85301;
	KEGG GENES	KEGG GENES(85301);
	GeneCard	COL27A1;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;