H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0007235 Created date: 26-Mar-2013 Last modified: 20-Apr-2012
Definition: Similar to Uncharacterized protein;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0007235
Genomic location  G-integra Help Chromosome 7
Location 7q36.1
Position 151653464- 151717019
Strand +
Antisense cluster ID(s) NA
Database links RefSeq NR_033169; 
Ensembl ENST00000416062;  ENST00000392800;  ENST00000468278;  ENST00000448366;  ENST00000483959;  ENST00000414073;  ENST00000482845;  ENST00000431418;  ENST00000426341;  ENST00000416269; 
Entrez Gene Entrez Gene ID:168391; 
KEGG GENES KEGG GENES(168391); 
GeneCard GeneCardGALNTL5;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Cluster member H-Inv ID(s) HIT000091075;  HIT000017958;  HIT000039356;  HIT000434533;  HIT000079686;  HIT000243059; 
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 
Mini-G Locus map Locus map

 
TOP 1-6 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000091075
Accession number BC025391.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RFB3)  [Identity/coverage = 73.815%/100.0%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q36.1
Position 151653534- 151717014
Strand +
Gene structure 12 exons
 
TOP 1-6 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000017958
Accession number AK093091.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RFB3)  [Identity/coverage = 80.769%/11.61%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q36.1
Position 151653511- 151717013
Strand +
Gene structure 12 exons
 
TOP 1-6 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000039356
Accession number BC022021.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RFB3)  [Identity/coverage = 72.545%/100.0%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q36.1
Position 151653511- 151717012
Strand +
Gene structure 9 exons
 
TOP 1-6 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000434533
Accession number AK315667.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RFB3)  [Identity/coverage = 73.138%/100.0%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q36.1
Position 151653507- 151716886
Strand +
Gene structure 10 exons
 
TOP 1-6 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000079686
Accession number AF440400.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RFB3)  [Identity/coverage = 70.317%/100.0%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q36.1
Position 151653534- 151716927
Strand +
Gene structure 8 exons
 
TOP 1-6 LAST 
Locus member number 6
H-Inv ID Transcript viewHIT000243059
Accession number AF440404.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (D3Z533)  [Identity/coverage = 69.565%/57.79%] to Mus musculus (Mouse). protein.
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 7
Location 7q36.1
Position 151653487- 151716941
Strand +
Gene structure 7 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms Internal AS; 
Position of alternative splicing isoforms Cassette;  Internal acceptor site; 
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000079686;  Splicing isoformHIT000434533;  Splicing isoformHIT000017958;  Splicing isoformHIT000039356;  Splicing isoformHIT000243059;  Splicing isoformHIT000091075; 
Related H-InvDB links H-DBASH-DBAS;  G-integraG-integra;  cDNA multiple alignmentcDNA-genome multiple alignment;  ORF multiple alignmentORF multiple alignment; 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0007235
Representative H-Inv ID Representative H-Inv IDHIT000091075
Accession number BC025391.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to Uncharacterized protein;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (E2RFB3)  [Identity/coverage = 73.815%/100.0%] to Canis familiaris (Dog) (Canis lupus familiaris). protein.
Gene family/group Gene family H-Inv gene family/group ID HIF0000039
Gene family/group name Putative Ricin B lectin (IPR000772).
Evidence motif (InterPro) ID IPR000772
Gene symbol/name HGNC symbol GALNTL5 
HGNC aliases "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15" 
HGNC name UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000339067
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NR_033169; 
Ensembl ENST00000416062;  ENST00000392800;  ENST00000468278;  ENST00000448366;  ENST00000483959;  ENST00000414073;  ENST00000482845;  ENST00000431418;  ENST00000426341;  ENST00000416269; 
Entrez Gene Entrez Gene ID:168391; 
KEGG GENES KEGG GENES(168391); 
GeneCard GeneCardGALNTL5;  *GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases; 
Related H-InvDB links G-integraG-integra;  PPI viewerPPI view;  H-DBASH-DBAS;  Putative Ricin B lectin (IPR000772). Similarity Search ToolSimilarity search tool;  TACTTACT; 
Gene expression information   H-ANGEL DNAProbeLocator Last modified:20-Apr-2012
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator		 AceGene AGhsC011510; 
Affymetrix
GeneChip		 HG-Focus NA
HG-U133 233150_at; 
HG-U133A NA
HG-U133A_2 NA
HG-U133B 233150_at; 
HG-U133_Plus_2 233150_at; 
HG-U95 77974_at; 
HG-U95A NA
HG-U95B NA
HG-U95C NA
HG-U95D 77974_at; 
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 3032214;  3032215;  3032219;  3032220;  3032221;  3032222;  3032223;  3032224;  3032225;  3032228;  3032230;  3032233;  3032234;  3032235;  3032236;  3032237;  3032238;  3032239;  3032240;  3080002;  3080003;  3080007; 
HuGeneFL NA
Agilent Human 1A Oligo Microarray:PGID215 A_23_P429601; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P429601; 
Related H-InvDB links H-ANGELH-ANGEL;  DNAProbeLocatorDNAProbeLocator; 

Disease/pathology information  DiseaseInfo Viewer LEGENDA Last modified:20-Apr-2012
Disease relation Disease name:NA
Related information in OMIM OMIM ID:NA Title:NA
Co-localized orphan diseases OMIM ID:  142335;  145290;  162820;  600510;  603098;  603383;  603511;  605727;  605967;  609636;  612514; 
Disease related mutation NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA) LEGENDA Gene name Entrez Gene ID:(168391); 
Disease Entrez Gene ID:(168391); 
Gene function Entrez Gene ID:(168391); 
Substance Entrez Gene ID:(168391); 
Related H-InvDB links DiseaseInfo ViewerDiseaseInfo Viewer;  LEGENDALEGENDA;