H-InvDB x AHG DB
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H-InvDB_8.3 released on March 26, 2013.
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H-Inv cluster ID: HIX0005252 Created date: 26-Mar-2013 Last modified: 26-Mar-2013
Definition: Protocadherin gamma-A1 isoform 1 precursor.
 
 

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0005252
Representative H-Inv ID Representative H-Inv IDHIT000071744
Accession number AF152318.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Protocadherin gamma-A1 isoform 1 precursor.
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (NP_061735)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene family/group Gene family H-Inv gene family/group ID HIF0000005
Gene family/group name Putative Zinc finger, C2H2-type (IPR007087).
Evidence motif (InterPro) ID IPR007087
Gene symbol/name HGNC symbol PCDHGA1  PCDHGA10  PCDHGA11  PCDHGA12  PCDHGA2  PCDHGA3  PCDHGA4  PCDHGA5  PCDHGA6  PCDHGA7  PCDHGA8  PCDHGA9  PCDHGB1  PCDHGB2  PCDHGB3  PCDHGB4  PCDHGB5  PCDHGB6  PCDHGB7  PCDHGC3  PCDHGC4  PCDHGC5 
HGNC aliases "cadherin 21" 
HGNC name protocadherin gamma subfamily A, 1  protocadherin gamma subfamily A, 10  protocadherin gamma subfamily A, 11  protocadherin gamma subfamily A, 12  protocadherin gamma subfamily A, 2  protocadherin gamma subfamily A, 3  protocadherin gamma subfamily A, 4  protocadherin gamma subfamily A, 5  protocadherin gamma subfamily A, 6  protocadherin gamma subfamily A, 7  protocadherin gamma subfamily A, 8  protocadherin gamma subfamily A, 9  protocadherin gamma subfamily B, 1  protocadherin gamma subfamily B, 2  protocadherin gamma subfamily B, 3  protocadherin gamma subfamily B, 4  protocadherin gamma subfamily B, 5  protocadherin gamma subfamily B, 6  protocadherin gamma subfamily B, 7  protocadherin gamma subfamily C, 3  protocadherin gamma subfamily C, 4  protocadherin gamma subfamily C, 5 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000067663
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NM_032407
Ensembl ENST00000394576ENST00000523390ENST00000518069ENST00000253812ENST00000252085ENST00000378105ENST00000252087ENST00000306593ENST00000522605ENST00000518882ENST00000305759ENST00000398587ENST00000528330ENST00000308177ENST00000520790ENST00000518325ENST00000517434ENST00000398604ENST00000517417ENST00000398594ENST00000398610
Entrez Gene Entrez Gene ID:56099Entrez Gene ID:56098Entrez Gene ID:56097Entrez Gene ID:5098Entrez Gene ID:56110Entrez Gene ID:56101Entrez Gene ID:56100Entrez Gene ID:56103Entrez Gene ID:8641Entrez Gene ID:56102Entrez Gene ID:56105Entrez Gene ID:56114Entrez Gene ID:9708Entrez Gene ID:56113Entrez Gene ID:56104Entrez Gene ID:56112Entrez Gene ID:56107Entrez Gene ID:56106Entrez Gene ID:56111Entrez Gene ID:56109Entrez Gene ID:56108Entrez Gene ID:26025
KEGG GENES KEGG GENES(56114)
GeneCard GeneCardPCDHGA12GeneCardPCDHGA10GeneCardPCDHGA11GeneCardPCDHGA9GeneCardPCDHGB7GeneCardPCDHGA8GeneCardPCDHGC5GeneCardPCDHGB6GeneCardPCDHGA7GeneCardPCDHGC4GeneCardPCDHGA6GeneCardPCDHGC3GeneCardPCDHGA5GeneCardPCDHGA4GeneCardPCDHGB3GeneCardPCDHGA3GeneCardPCDHGB2GeneCardPCDHGB5GeneCardPCDHGA2GeneCardPCDHGB4GeneCardPCDHGA1GeneCardPCDHGB1*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Putative Zinc finger, C2H2-type (IPR007087). Similarity Search ToolSimilarity search tool TACTTACT