H-InvDB x AHG DB
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H-InvDB_9.0 released on May 27, 2015.
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H-Inv cluster ID: HIX0005064 Created date: 26-Mar-2013 Last modified: 27-May-2015
Definition: CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase; EC=2.4.99.-; Alpha-2,8-sialyltransferase 8D; Polysialyltransferase-1; Sialyltransferase 8D; SIAT8-D; Sialyltransferase St8Sia IV; ST8SiaIV;
 
 

Gene structure  G-integra H-DBAS
H-Inv cluster ID HIX0005064
Genomic location  G-integra Help Chromosome 5
Location 5q21.1
Position 100142639- 100238987
Strand -
Antisense cluster ID(s) NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:7903
KEGG GENES KEGG GENES(7903)
GeneCard GeneCardST8SIA4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Cluster member H-Inv ID(s) HIT000053961HIT000040323HIT000193787HIT000425669HIT000096320
Additional cluster member candidate(s) NA
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment
Mini-G Locus map Locus map

 
TOP 1-5 LAST 
Cluster member (s)  G-integra H-DBAS
Locus member number 1
H-Inv ID Transcript viewHIT000053961
Accession number BC053657.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase; EC=2.4.99.-; Alpha-2,8-sialyltransferase 8D; Polysialyltransferase-1; Sialyltransferase 8D; SIAT8-D; Sialyltransferase St8Sia IV; ST8SiaIV;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q92187)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ST8SIA4 
HGNC aliases "sialyltransferase 8 (alpha-2, 8-polysialytransferase) D" 
HGNC name ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 
Transcript feature Representative H-Inv IDRepresentative transcript;  Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q21.1
Position 100145359- 100238970
Strand -
Gene structure 5 exons
 
TOP 1-5 LAST 
Locus member number 2
H-Inv ID Transcript viewHIT000040323
Accession number BC027866.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Similar to CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase; EC=2.4.99.-; Alpha-2,8-sialyltransferase 8D; Polysialyltransferase-1; Sialyltransferase 8D; SIAT8-D; Sialyltransferase St8Sia IV; ST8SiaIV;
Similarity category  Help Category: Similar to known protein(Category II).
Similar to known protein (Q92187)  [Identity/coverage = 99.405%/46.8%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ST8SIA4 
HGNC aliases "sialyltransferase 8 (alpha-2, 8-polysialytransferase) D" 
HGNC name ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 
Transcript feature Splicing isoformSplicing isoform
Genomic location  G-integra Chromosome 5
Location 5q21.1
Position 100221015- 100238918
Strand -
Gene structure 3 exons
 
TOP 1-5 LAST 
Locus member number 3
H-Inv ID Transcript viewHIT000193787
Accession number L41680.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase; EC=2.4.99.-; Alpha-2,8-sialyltransferase 8D; Polysialyltransferase-1; Sialyltransferase 8D; SIAT8-D; Sialyltransferase St8Sia IV; ST8SiaIV;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q92187)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ST8SIA4 
HGNC aliases "sialyltransferase 8 (alpha-2, 8-polysialytransferase) D" 
HGNC name ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 
Transcript feature NA
Genomic location  G-integra Chromosome 5
Location 5q21.1
Position 100146949- 100238871
Strand -
Gene structure 5 exons
 
TOP 1-5 LAST 
Locus member number 4
H-Inv ID Transcript viewHIT000425669
Accession number AK292872.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase; EC=2.4.99.-; Alpha-2,8-sialyltransferase 8D; Polysialyltransferase-1; Sialyltransferase 8D; SIAT8-D; Sialyltransferase St8Sia IV; ST8SiaIV;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q92187)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene symbol/name HGNC symbol ST8SIA4 
HGNC aliases "sialyltransferase 8 (alpha-2, 8-polysialytransferase) D" 
HGNC name ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 
Transcript feature NA
Genomic location  G-integra Chromosome 5
Location 5q21.1
Position 100147338- 100238941
Strand -
Gene structure 5 exons
 
TOP 1-5 LAST 
Locus member number 5
H-Inv ID Transcript viewHIT000096320
Accession number BC040671.2
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition Conserved hypothetical protein.
Similarity category  Help Category: Conserved hypothetical protein(Category IV).
Conserved hypothetical protein.
Gene symbol/name HGNC symbol ST8SIA4 
HGNC aliases "sialyltransferase 8 (alpha-2, 8-polysialytransferase) D" 
HGNC name ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 
Transcript feature NA
Genomic location  G-integra Chromosome 5
Location 5q21.1
Position 100142906- 100145817
Strand -
Gene structure 1 exons

Alternative splicing (AS) information  G-integra H-DBAS
Pattern of alternative splicing isoforms 3' terminal AS;  Internal AS; 
Position of alternative splicing isoforms NA
Alternative splicing isoform H-Inv ID(s) Splicing isoformHIT000040323Splicing isoformHIT000053961
Related H-InvDB links H-DBASH-DBAS G-integraG-integra cDNA multiple alignmentcDNA-genome multiple alignment ORF multiple alignmentORF multiple alignment

Gene function information  G-integra PPI viewer H-DBAS Gene family Similarity Search Tool TACT
H-Inv cluster ID HIX0005064
Representative H-Inv ID Representative H-Inv IDHIT000053961
Accession number BC053657.1
CAGE tag ID NA
EST ID NA
Coding potential Protein coding; 
Definition CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase; EC=2.4.99.-; Alpha-2,8-sialyltransferase 8D; Polysialyltransferase-1; Sialyltransferase 8D; SIAT8-D; Sialyltransferase St8Sia IV; ST8SiaIV;
Similarity category  Help Category: Identical to known human protein(Category I).
Identical to known human protein (Q92187)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens (Human). protein.
Gene family/group Gene family H-Inv gene family/group ID NA
Gene family/group name NA
Evidence motif (InterPro) ID NA
Gene symbol/name HGNC symbol ST8SIA4 
HGNC aliases "sialyltransferase 8 (alpha-2, 8-polysialytransferase) D" 
HGNC name ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 
Protein-protein interaction (PPI) PPI viewer H-Inv protein ID HIP000094442
No. of interaction NA
Interaction partner(s) NA
BIND NA
DIP NA
MINT NA
HPRD NA
IntAct NA
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:7903
KEGG GENES KEGG GENES(7903)
GeneCard GeneCardST8SIA4*GeneCards is provided free to academic non-profit institutions.
etc H-GOLDHuman-Gene diversity Of Life-style related Diseases
Related H-InvDB links G-integraG-integra PPI viewerPPI view H-DBASH-DBAS Gene familyGene family;  Similarity Search ToolSimilarity search tool TACTTACT
Gene expression information   H-ANGEL DNAProbeLocator Last modified:27-May-2015
Tissue-specific expression  H-ANGEL NA
Probe
information DNAProbeLocator
AceGene AGhsA020716; 
Affymetrix
GeneChip
HG-Focus 206925_at; 
HG-U133 206925_at;  230261_at;  242943_at; 
HG-U133A 206925_at; 
HG-U133A_2 206925_at; 
HG-U133B 230261_at;  242943_at; 
HG-U133_Plus_2 206925_at;  230261_at;  242943_at; 
HG-U95 33649_at;  46175_i_at;  46176_r_at;  80847_at; 
HG-U95A 33649_at; 
HG-U95B 46175_i_at;  46176_r_at; 
HG-U95C NA
HG-U95D 80847_at; 
HG-U95E NA
HG-U95Av2 NA
HuEx-1_0 2822022;  2868912;  2868913;  2868914;  2868915;  2868916;  2868917;  2868918;  2868938;  2868939;  2868940;  2868944;  2868946;  2868951;  2868952;  2868953;  2868954;  2868955; 
HuGeneFL L41680_at; 
Agilent Human 1A Oligo Microarray:PGID215 A_23_P41693; 
Whole Human Genome Oligo Microarray:PGID247 A_23_P361984; 
Related H-InvDB links H-ANGELH-ANGEL DNAProbeLocatorDNAProbeLocator