H-InvDB_8.3 released on March 26, 2013. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

Home Quick guide Navi BLAST Site map Download Contact us Help

Transcript view Protein view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS

H-Inv cluster ID: HIX0001372 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Glycosaminoglycan xylosylkinase precursor.

		Select format Flat file XML file

Gene structure

H-Inv cluster ID		HIX0001372
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178994939- 179045702
	Strand	+
Antisense cluster ID(s)		NA
Database links	RefSeq	NM_014864;
	Ensembl	ENST00000440702;  ENST00000263733;
	Entrez Gene	Entrez Gene ID:9917;
	KEGG GENES	KEGG GENES(9917);
	GeneCard	FAM20B;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Cluster member H-Inv ID(s)		HIT000000192;  HIT000053684;  HIT000053040;  HIT000487740;  HIT000422786;
Additional cluster member candidate(s)		NA
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

 

TOP 1-5 LAST

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000000192
Accession number		AB007944.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
Transcript feature		Representative transcript;
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178995031- 179045697
	Strand	+
Gene structure		8 exons

 

TOP 1-5 LAST

Locus member number		2
H-Inv ID		HIT000053684
Accession number		BC051794.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178995074- 179045698
	Strand	+
Gene structure		8 exons

 

TOP 1-5 LAST

Locus member number		3
H-Inv ID		HIT000053040
Accession number		BC046441.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178995206- 179041775
	Strand	+
Gene structure		8 exons

 

TOP 1-5 LAST

Locus member number		4
H-Inv ID		HIT000487740
Accession number		AB480690.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178995074- 179045702
	Strand	+
Gene structure		8 exons

 

TOP 1-5 LAST

Locus member number		5
H-Inv ID		HIT000422786
Accession number		AK289989.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.2
	Position	178995176- 179041692
	Strand	+
Gene structure		8 exons

Gene function information

H-Inv cluster ID		HIX0001372
Representative H-Inv ID		HIT000000192
Accession number		AB007944.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Glycosaminoglycan xylosylkinase precursor.
Similarity category		Category: Identical to known human protein(Category I).
		Identical to known human protein (NP_055679)  [Identity/coverage = 100.0%/100.0%] to Homo sapiens protein.
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	FAM20B
	HGNC aliases	NA
	HGNC name	family with sequence similarity 20, member B
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000068238
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NM_014864;
	Ensembl	ENST00000440702;  ENST00000263733;
	Entrez Gene	Entrez Gene ID:9917;
	KEGG GENES	KEGG GENES(9917);
	GeneCard	FAM20B;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Related H-InvDB links		G-integra;  PPI view;  H-DBAS;  Gene family;  Similarity search tool;  TACT;

Gene expression information

Last modified:20-Apr-2012

Tissue-specific expression			NA
Probe information	AceGene		AGhsA250414;
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	202915_s_at;  202916_s_at;
		HG-U133A	202915_s_at;  202916_s_at;
		HG-U133A_2	202915_s_at;  202916_s_at;
		HG-U133B	NA
		HG-U133_Plus_2	202915_s_at;  202916_s_at;
		HG-U95	35318_at;
		HG-U95A	35318_at;
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	2369465;  2369469;  2369470;  2369471;  2369472;  2369474;  2369475;  2369477;  2369479;  2369480;  2369481;  2446036;  2446038;  2651759;  4026876;
		HuGeneFL	NA
	Agilent	Human 1A Oligo Microarray:PGID215	A_23_P103923;
		Whole Human Genome Oligo Microarray:PGID247	A_23_P103923;  A_24_P148043;  A_24_P160649;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:20-Apr-2012

Disease relation			Disease name:NA
Related information in OMIM			OMIM ID:NA Title:NA
Co-localized orphan diseases			OMIM ID:  270750;  608526;  611154;
Disease related mutation			NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA)	Gene name	Entrez Gene ID:(9917);
	Disease	Entrez Gene ID:(9917);
	Gene function	Entrez Gene ID:(9917);
	Substance	Entrez Gene ID:(9917);
Related H-InvDB links			DiseaseInfo Viewer;  LEGENDA;