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H-Inv cluster ID: HIX0001352 Created date: 26-Mar-2013 Last modified: 20-Apr-2012 Definition: Similar to Uncharacterized protein;

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Gene structure

H-Inv cluster ID		HIX0001352
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126123- 175162229
	Strand	-
Antisense cluster ID(s)		NA
Database links	RefSeq	NM_014656;
	Ensembl	ENST00000423313;  ENST00000546143;  ENST00000545251;  ENST00000444639;
	Entrez Gene	Entrez Gene ID:9674;
	KEGG GENES	KEGG GENES(9674);
	GeneCard	KIAA0040;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Cluster member H-Inv ID(s)		HIT000250094;  HIT000042186;  HIT000250093;  HIT000092617;  HIT000304247;  HIT000425488;  HIT000090245;  HIT000339979;  HIT000259116;  HIT000282115;  HIT000297289;
Additional cluster member candidate(s)		NA
Related H-InvDB links		H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

 

TOP 1-10 11-11 LAST

Cluster member (s)

Locus member number		1
H-Inv ID		HIT000250094
Accession number		AL049800.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.717%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		Representative transcript;  Splicing isoform
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126123- 175162079
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		2
H-Inv ID		HIT000042186
Accession number		D25539.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 69.697%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		Splicing isoform
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126123- 175161833
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		3
H-Inv ID		HIT000250093
Accession number		AL049799.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.717%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126123- 175161929
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		4
H-Inv ID		HIT000092617
Accession number		BC032361.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.717%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126673- 175161867
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		5
H-Inv ID		HIT000304247
Accession number		CR625052.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.717%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175129122- 175162093
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		6
H-Inv ID		HIT000425488
Accession number		AK292691.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.875%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175129153- 175161946
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		7
H-Inv ID		HIT000090245
Accession number		BC020789.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q0N9)  [Identity/coverage = 67.241%/48.36%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175129954- 175161912
	Strand	-
Gene structure		4 exons

 

TOP 1-10 11-11 LAST

Locus member number		8
H-Inv ID		HIT000339979
Accession number		BC111699.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.875%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		Splicing isoform
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175127008- 175161873
	Strand	-
Gene structure		3 exons

 

TOP 1-10 11-11 LAST

Locus member number		9
H-Inv ID		HIT000259116
Accession number		BC050374.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.717%/100.0%] to Mus musculus (Mouse). protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175128089- 175161890
	Strand	-
Gene structure		3 exons

 

TOP 1-10 11-11 LAST

Locus member number		10
H-Inv ID		HIT000282115
Accession number		CR602920.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Hypothetical protein.
Similarity category		Category: Hypothetical protein(Category V).
		Hypothetical protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126157- 175127147
	Strand	-
Gene structure		1 exons

 

TOP 1-10 11-11 LAST

Locus member number		11
H-Inv ID		HIT000297289
Accession number		CR618094.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Hypothetical short protein.
Similarity category		Category: Hypothetical short protein(Category VI).
		Hypothetical short protein.
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Transcript feature		NA
Genomic location	Chromosome	1
	Location	1q25.1
	Position	175126670- 175127447
	Strand	-
Gene structure		1 exons

Alternative splicing (AS) information

Pattern of alternative splicing isoforms	5' terminal AS;  Internal AS;
Position of alternative splicing isoforms	Cassette;
Alternative splicing isoform H-Inv ID(s)	HIT000042186;  HIT000250094;  HIT000339979;
Related H-InvDB links	H-DBAS;  G-integra;  cDNA-genome multiple alignment;  ORF multiple alignment;

Gene function information

H-Inv cluster ID		HIX0001352
Representative H-Inv ID		HIT000250094
Accession number		AL049800.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding;
Definition		Similar to Uncharacterized protein;
Similarity category		Category: Similar to known protein(Category II).
		Similar to known protein (E9Q2T4)  [Identity/coverage = 71.717%/100.0%] to Mus musculus (Mouse). protein.
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
Gene symbol/name	HGNC symbol	KIAA0040
	HGNC aliases	NA
	HGNC name	KIAA0040
Protein-protein interaction (PPI)	H-Inv protein ID	HIP000235566
	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NM_014656;
	Ensembl	ENST00000423313;  ENST00000546143;  ENST00000545251;  ENST00000444639;
	Entrez Gene	Entrez Gene ID:9674;
	KEGG GENES	KEGG GENES(9674);
	GeneCard	KIAA0040;  *GeneCards is provided free to academic non-profit institutions.
	etc	Human-Gene diversity Of Life-style related Diseases;
Related H-InvDB links		G-integra;  PPI view;  H-DBAS;  Gene family;  Similarity search tool;  TACT;

Gene expression information

Last modified:20-Apr-2012

Tissue-specific expression			NA
Probe information	AceGene		AGhsA250409;
	Affymetrix GeneChip	HG-Focus	NA
		HG-U133	203143_s_at;  203144_s_at;
		HG-U133A	203143_s_at;  203144_s_at;
		HG-U133A_2	203143_s_at;  203144_s_at;
		HG-U133B	NA
		HG-U133_Plus_2	203143_s_at;  203144_s_at;
		HG-U95	40156_at;
		HG-U95A	40156_at;
		HG-U95B	NA
		HG-U95C	NA
		HG-U95D	NA
		HG-U95E	NA
		HG-U95Av2	NA
		HuEx-1_0	2368287;  2368289;  2368291;  2368292;  2368293;  2368294;  2368295;  2444843;  2444844;  2444845;  2444846;  2444847;  2444848;  2444849;  2444850;  2444851;  2444853;  2444858;  2444862;
		HuGeneFL	D25539_at;
	Agilent	Human 1A Oligo Microarray:PGID215	A_23_P51327;
		Whole Human Genome Oligo Microarray:PGID247	A_24_P11142;  A_24_P79617;
Related H-InvDB links			H-ANGEL;  DNAProbeLocator;

Disease/pathology information

Last modified:20-Apr-2012

Disease relation			Disease name:NA
Related information in OMIM			OMIM ID:NA Title:NA
Co-localized orphan diseases			OMIM ID:  270750;  608526;  611154;
Disease related mutation			NA
Co-occurred words and phrases with this gene name in PubMed (LEGENDA)	Gene name	Entrez Gene ID:(9674);
	Disease	Entrez Gene ID:(9674);
	Gene function	Entrez Gene ID:(9674);
	Substance	Entrez Gene ID:(9674);
Related H-InvDB links			DiseaseInfo Viewer;  LEGENDA;