H-InvDB x AHG DB
Repeat Mask Viewer
H-InvDB_8.3 released on March 26, 2013.
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No. SW score perc div. perc del. perc ins. query sequence position in query begin end(left) strand matching repeat repeat class/family position in repeat begin end(left) ID
1 209 32.2 5.1 2.5 HIT000055328 372-489(3172) C MIRb SINE/MIR (61)207-87 1
2 238 28.9 6.2 7.2 HIT000055328 1082-1178(2483) C L2c LINE/L2 (38)3337-3242 2
3 330 32.6 10.0 1.7 HIT000055328 1281-1520(2141) C L2c LINE/L2 (181)3206-2947 2
4 706 20.0 14.5 0.5 HIT000055328 1767-1987(1674) + MLT1D LTR/MaLR 252-503(2) 3
5 584 16.1 5.1 0.0 HIT000055328 1998-2115(1546) + LTR56 LTR/ERV1 1-124(321) 4
6 3287 14.4 5.1 5.6 HIT000055328 2116-2718(943) + MER4A1_ LTR/ERV1 1-600(0) 5
7 3323 14.4 2.2 0.2 HIT000055328 3013-3615(46) + LTR8A LTR/ERV1 1-615(112) 6