H-InvDB x AHG DB
Protein view
H-InvDB_9.0 released on May 27, 2015.
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H-Inv protein ID: HIP000067663 Last modified: 27-May-2015
Definition: Protocadherin gamma-A1; PCDH-gamma-A1; Precursor;
[Summery][Full]
[Protein Info][Member][Motif] 
provide location, ID and descriptions of functional motifs (InterPro)[Function] 
provide human-curated functional definition, similarity
category and related evidences;  Gene name; 
HUGO gene symbols; GO term; EC number; pathway information (KEGG)[PTM][Subcellular loc.] 
provide subcellular localization prediction by WolfPSORT, Target P, SOSUI, TMHMM and PTS1[Protein Structure][Evolutionary info.] 
provide orthologs relationships, phylogenic trees and sequence alignments[Polymorphism/repeat] 
provide polymorphism (SNP, indel), microsatellite (Short Tandem Repeat, STR) and repeat information

Protein information
HIP ID HIP000067663
Length 931
Codon Adaptation Index (CAI). 0.752
Database links RefSeq NA
UniProt Q9Y5H4 ;
CCDS Q9Y5H4;
Original transcript information
Representative H-Inv transcript ID Transcript view HIT000071744
H-Inv cluster ID Locus view HIX0005252
Predicted CDS 1..2796 ; 931[aa] ; Orientation:+1 ;
Genomic location Chromosome 5
Location 5q31.3
CDS position 140710252-140892546
Strand +
Accession number AF152318.1
CAGE tag ID NA
EST ID NA
Clone Number NA
Experimental resources NBRC: NITE Biological Resource Center NBRC     Antibody: searching human antibodies at "BIO-kaimono.com" Antibody (PCDHGA1) ; (PCDHGA10) ; (PCDHGA11) ; (PCDHGA12) ; (PCDHGA2) ; (PCDHGA3) ; (PCDHGA4) ; (PCDHGA5) ; (PCDHGA6) ; (PCDHGA7) ; (PCDHGA8) ; (PCDHGA9) ; (PCDHGB1) ; (PCDHGB2) ; (PCDHGB3) ; (PCDHGB4) ; (PCDHGB5) ; (PCDHGB6) ; (PCDHGB7) ; (PCDHGC3) ; (PCDHGC4) ; (PCDHGC5) ;   Catalog: searching experimental product catalogs at "BIO-kaimono.com" Catalog (PCDHGA1) ; (PCDHGA10) ; (PCDHGA11) ; (PCDHGA12) ; (PCDHGA2) ; (PCDHGA3) ; (PCDHGA4) ; (PCDHGA5) ; (PCDHGA6) ; (PCDHGA7) ; (PCDHGA8) ; (PCDHGA9) ; (PCDHGB1) ; (PCDHGB2) ; (PCDHGB3) ; (PCDHGB4) ; (PCDHGB5) ; (PCDHGB6) ; (PCDHGB7) ; (PCDHGC3) ; (PCDHGC4) ; (PCDHGC5) ;
Length of cDNA 4602[bp] (No. of exon:4)[A:1075 T:1005 G:1167 C:1355] ;
Database links RefSeq NA
Ensembl NA
Entrez Gene Entrez Gene ID:56114 ;
KEGG GENES KEGG GENES(56114) ;
GeneCard GeneCard PCDHGA1 ; PCDHGA10 ; PCDHGA11 ; PCDHGA12 ; PCDHGA2 ; PCDHGA3 ; PCDHGA4 ; PCDHGA5 ; PCDHGA6 ; PCDHGA7 ; PCDHGA8 ; PCDHGA9 ; PCDHGB1 ; PCDHGB2 ; PCDHGB3 ; PCDHGB4 ; PCDHGB5 ; PCDHGB6 ; PCDHGB7 ; PCDHGC3 ; PCDHGC4 ; PCDHGC5 ;
etc H-GOLD Human-Gene diversity Of Life-style related Diseases ;
Protein view