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Transcript view Locus view G-integra DiseaseInfo Viewer H-ANGEL Evola PPI view Gene Family/Group Hyperlink MS |
H-Inv protein ID: | HIP000061717 | Last modified: | 27-May-2015 |
Definition: | Flap endonuclease GEN homolog 1; EC=3.1.-.-; |
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Coresponding transcript member (s) |
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No. | 1 | |
H-Inv ID | HIT000249675 | |
H-Inv cluster ID | HIX0001847 | |
Accession number | AK131387.1 | |
CAGE tag ID | NA | |
EST ID | NA | |
Coding potential | Protein coding | |
Definition | Flap endonuclease GEN homolog 1; EC=3.1.-.-; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q17RS7) [Identity/coverage = 99.559%/100.0%] to Homo sapiens (Human). protein. | ||
Transcript feature | NA | |
Genomic Location | Chromosome | 2 |
Location | 2p24.2 | |
CDS position | 17935177-17963430 | |
Strand | + | |
Gene structure | 14 exons |
Motif information in predicted CDS |
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a.a. length |
InterPro | Name |
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93 | IPR006085 | XPG N-terminal [Domain] | |
96 | IPR006085 | XPG N-terminal [Domain] | |
192 | IPR029060 | PIN domain-like [Domain] | |
207 | IPR029060 | PIN domain-like [Domain] | |
72 | IPR006086 | XPG-I domain [Domain] | |
86 | IPR006086 | XPG-I domain [Domain] | |
45 | IPR020045 | 5'-3' exonuclease, C-terminal domain [Domain] | |
35 | IPR008918 | Helix-hairpin-helix motif, class 2 [Conserved_site] | |
63 | IPR020045 | 5'-3' exonuclease, C-terminal domain [Domain] |
Protein function information |
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H-Inv protein ID | HIP000061717 | |
Representative H-Inv transcript ID | HIT000249675 | |
H-Inv cluster ID | HIX0001847 | |
Definition | Flap endonuclease GEN homolog 1; EC=3.1.-.-; | |
Similarity category | Identical to known human protein(Category I). | |
Identical to known human protein (Q17RS7) [Identity/coverage = 99.559%/100.0%] to Homo sapiens (Human). protein. | ||
Gene family/group | H-Inv gene family/group ID | NA |
Gene family/group name | NA | |
Evidence motif (InterPro) ID | NA | |
EC number | EC 3.1.-.- Acting on Ester Bonds | |
KEGG metabolic pathway | NA | |
Protein-protein interaction (PPI) | No. of interaction | 2 |
Interaction partner(s) | HIP000025861; HIP000070521; | |
BIND | NA | |
DIP | NA | |
MINT | NA | |
HPRD | NA | |
IntAct | NA | |
Database links | RefSeq | NA |
UniProt | NA | |
CCDS | NA | |
Gene symbol/name | HGNC symbol | GEN1 |
HGNC aliases | "Gen endonuclease homolog 1 (Drosophila)"; | |
HGNC name | GEN1 Holliday junction 5' flap endonuclease; | |
Related H-InvDB links | G-integra ; PPI view ; TACT ; |
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Protein structure information (GTOP) | Last modified : 27-May-2015 |
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Translation polymorphism (SNP) and microsatellite (STR) information |
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