H-InvDB_9.0 released on May 27, 2015. Search by Keyword H-Inv ID (HIT) H-Inv cluster ID (HIX) H-Inv protein ID (HIP) H-Inv gene family/group (HIF) Accession number Chromosome number Chromosome band Definition* Data source ID --- CCDS ID dbSNP ID (rs number) EC number Ensembl ID EntrezGene ID FR ID FR Accession number GO ID GO name* HGNC gene symbol HGNC gene name* InterPro ID InterPro name* OMIM ID OMIM title* Pathway ID Pathway name* RefSeq (gene) ID RefSeq (protein) ID SCOP ID UniProt for Advanced Search

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H-Inv protein ID:	HIP000042706	Last modified:	27-May-2015
Definition:	Conserved hypothetical protein.

Select FormatXML fileFlat fileProtein sequence fasta

Protein information HIP ID HIP000042706 Length 82 Codon Adaptation Index (CAI). 0.796 Database links RefSeq NA UniProt NA CCDS NA Original transcript information Representative H-Inv transcript ID HIT000088897 H-Inv cluster ID HIX0031039 Predicted CDS 922..1170 ; 82[aa] ; Orientation:+1 ; Genomic location Chromosome 3 Location 3p11.1 CDS position 88214246-88215617 Strand + Accession number BC016013.1 CAGE tag ID NA EST ID NA Clone Number IMAGE:4695648 Experimental resources NBRC       Length of cDNA 1400[bp] (No. of exon:1)[A:422 T:467 G:286 C:225] ; Database links RefSeq NA Ensembl NA Entrez Gene Entrez Gene ID:285237 ; KEGG GENES KEGG GENES(285237) ; GeneCard NA etc Human-Gene diversity Of Life-style related Diseases ;

MDSCSVTQAGVQWHKLGSLQPPPPRIKRFSCLSLLSSWDYRHAPPCPANFCIFSRDRVSPCWPGWSQTPDLVIHPPWPPRVL*

Coresponding transcript member (s)

No.		1
H-Inv ID		HIT000088897
H-Inv cluster ID		HIX0031039
Accession number		BC016013.1
CAGE tag ID		NA
EST ID		NA
Coding potential		Protein coding
Definition		Conserved hypothetical protein.
Similarity category		Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Transcript feature		Representative transcript;
Genomic Location	Chromosome	3
	Location	3p11.1
	CDS position	88214246-88215617
	Strand	+
Gene structure		1 exons

Protein function information

H-Inv protein ID		HIP000042706
Representative H-Inv transcript ID		HIT000088897
H-Inv cluster ID		HIX0031039
Definition		Conserved hypothetical protein.
Similarity category		Conserved hypothetical protein(Category IV).
		Conserved hypothetical protein.
Gene family/group	H-Inv gene family/group ID	NA
	Gene family/group name	NA
	Evidence motif (InterPro) ID	NA
EC number		NA
KEGG metabolic pathway		NA
Protein-protein interaction (PPI)	No. of interaction	NA
	Interaction partner(s)	NA
	BIND	NA
	DIP	NA
	MINT	NA
	HPRD	NA
	IntAct	NA
Database links	RefSeq	NA
	UniProt	NA
	CCDS	NA
Gene symbol/name	HGNC symbol	NA
	HGNC aliases	NA
	HGNC name	NA
Related H-InvDB links		G-integra ; PPI view ; TACT ;

Glycosylation GPDB (GlycoProtDB) ID NA Protein name NA Organism NA Length(aa) NA

Subcellular localization information WoLF PSORT nuclear; Target P Other SOSUI soluble protein TMHMM soluble protein PTS1 Not targeted Related H-InvDB links LIFEdb;  JRE-1.4.0 or later is required. Download JRE at Sun's web site.

Translation polymorphism (SNP) and microsatellite (STR) information

Single Nucleotide Polymorphism (SNP) and indel Location Variation dbSNP ID Strand CDS/UTR Translation 923..923 T/C rs6419866 + CDS Nonsynonymous[Met1Thr] 1003..1003 C/T rs190861884 + CDS AA-STOP[Arg28*] 1031..1031 G/A rs183374467 + CDS Nonsynonymous[Ser37Asn] 1061..1061 C/T rs35620270 + CDS Nonsynonymous[Pro47Leu] 1073..1073 G/A rs146825161 + CDS Nonsynonymous[Cys51Tyr] 1098..1098 A/T rs7426645 + CDS Synonymous[Ser59Ser] 1167..1167 G/A rs140326094 + CDS Synonymous[Leu82Leu] Microsatellite (Short Tandem Repeat, STR) Location Variation Strand No data available Related H-InvDB links VaryGene ;