bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000145706
Representative transcript
genome : 94,798,273 - 94,804,027 (5,755)
query : 1 - 780 (780/780)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000242643
Pan
sp. (Chimpanzee) : XM_001147059
Pongo
sp. (Orangutan) : CR857749
Macaca
sp. (Macaque) : XM_001086734
Mus
sp. (Mouse) : AK080625
Rattus
sp. (Rat) : AY040223
Canis
sp. (Dog) : XM_855325
Equus
sp. (Horse) : XM_001488972
Bos
sp. (Cow) : AF480862
Monodelphis
sp. (Opossum) : ENSMODT00000010314
Gallus
sp. (Chicken) : AJ720266
Danio
sp. (Zebrafish) : BC121722
Oryzias
sp. (Medaka) : ENSORLT00000016362
Tetraodon
sp. (Tetraodon) : CR701524
SINFRUT00000145708
Representative transcript
genome : 94,804,898 - 94,814,797 (9,900)
query : 1 - 2,442 (2,442/2,442)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000046541
Pan
sp. (Chimpanzee) : XM_001147810
Pongo
sp. (Orangutan) : CR857216
Macaca
sp. (Macaque) : AB179171
Mus
sp. (Mouse) : BC012250
Rattus
sp. (Rat) : XM_001061160
Canis
sp. (Dog) : XM_534539
Equus
sp. (Horse) : XM_001489052
Bos
sp. (Cow) : ENSBTAT00000018980
Monodelphis
sp. (Opossum) : ENSMODT00000010386
Gallus
sp. (Chicken) : CR385372
Danio
sp. (Zebrafish) : AY491507
Oryzias
sp. (Medaka) : ENSORLT00000016315
scaffold_38
94793150-94809149 D +
NCBI
SINE_TE
(TG)n
(TG)n
(TG)n
AT_rich
(ATTG)n