bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000175293
Representative transcript
genome : 74,361,931 - 74,366,644 (4,714)
query : 1 - 1,683 (1,683/1,683)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000328813
Pan
sp. (Chimpanzee) : XM_001138727
Pongo
sp. (Orangutan) : ENSPPYT00000005880
Macaca
sp. (Macaque) : XM_001102727
Mus
sp. (Mouse) : BC062932
Canis
sp. (Dog) : XM_543397
Equus
sp. (Horse) : XM_001494131
Bos
sp. (Cow) : ENSBTAT00000001552
Monodelphis
sp. (Opossum) : ENSMODT00000015567
Gallus
sp. (Chicken) : AJ719925
Oryzias
sp. (Medaka) : ENSORLT00000000644
Tetraodon
sp. (Tetraodon) : GSTENT00025296001
SINFRUT00000145408
Representative transcript
genome : 74,369,966 - 74,371,841 (1,876)
query : 1 - 1,299 (1,299/1,299)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000002727
Pan
sp. (Chimpanzee) : XM_528518
Pongo
sp. (Orangutan) : ENSPPYT00000023142
Macaca
sp. (Macaque) : XM_001087200
Mus
sp. (Mouse) : AK155540
Rattus
sp. (Rat) : XM_001072253
Canis
sp. (Dog) : XM_548350
Equus
sp. (Horse) : XM_001491123
Monodelphis
sp. (Opossum) : XM_001374689
Danio
sp. (Zebrafish) : BC092931
Oryzias
sp. (Medaka) : ENSORLT00000000650
Tetraodon
sp. (Tetraodon) : CR695365
SINFRUT00000145404
Representative transcript
genome : 74,373,046 - 74,375,657 (2,612)
query : 1 - 846 (846/846)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
scaffold_27
74362903-74378902 D +
NCBI
(TG)n
GC_rich
(TTA)n
(CTG)n
(TG)n
(CAAA)n
SINE_FR1d
SINE_FR2
GC_rich