bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000180941
Representative transcript
genome : 333,308,696 - 333,314,723 (6,028)
query : 1 - 1,968 (1,968/1,968)
12 exons
identity = 0.995
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000241975
Pan
sp. (Chimpanzee) : XR_022737
Pongo
sp. (Orangutan) : ENSPPYT00000013287
Macaca
sp. (Macaque) : XM_001106893
Mus
sp. (Mouse) : AK220454
Rattus
sp. (Rat) : BC062389
Canis
sp. (Dog) : XM_544899
Equus
sp. (Horse) : ENSECAT00000006840
Bos
sp. (Cow) : XM_607988
Monodelphis
sp. (Opossum) : ENSMODT00000026680
Gallus
sp. (Chicken) : CR354028
Danio
sp. (Zebrafish) : XM_001920350
Oryzias
sp. (Medaka) : ENSORLT00000015712
Tetraodon
sp. (Tetraodon) : GSTENT00016298001
SINFRUT00000132717
Representative transcript
genome : 333,315,768 - 333,316,497 (730)
query : 1 - 657 (657/657)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032249
Pongo
sp. (Orangutan) : ENSPPYT00000005381
Macaca
sp. (Macaque) : XM_001091708
Mus
sp. (Mouse) : AK160336
Rattus
sp. (Rat) : BC079170
Canis
sp. (Dog) : XM_543661
Equus
sp. (Horse) : XM_001504369
Bos
sp. (Cow) : BC105530
Danio
sp. (Zebrafish) : BC153536
Oryzias
sp. (Medaka) : ENSORLT00000015724
Tetraodon
sp. (Tetraodon) : CR692001
SINFRUT00000132714
Representative transcript
genome : 333,318,890 - 333,321,898 (3,009)
query : 1 - 2,928 (2,928/2,928)
2 exons
identity = 1.000
3'(0.997;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000241961
Pan
sp. (Chimpanzee) : XM_001135298
Pongo
sp. (Orangutan) : ENSPPYT00000013288
Macaca
sp. (Macaque) : AB179060
Mus
sp. (Mouse) : AK031118
Rattus
sp. (Rat) : ENSRNOT00000041177
Canis
sp. (Dog) : XM_544900
Equus
sp. (Horse) : XM_001492957
Bos
sp. (Cow) : BC133347
Monodelphis
sp. (Opossum) : XM_001362584
Gallus
sp. (Chicken) : XM_001233009
Danio
sp. (Zebrafish) : XM_690101
Oryzias
sp. (Medaka) : ENSORLT00000015734
Tetraodon
sp. (Tetraodon) : GSTENT00016296001
SINFRUT00000166013
Representative transcript
genome : 333,325,048 - 333,331,182 (6,135)
query : 1 - 1,440 (1,440/1,440)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
scaffold_572
333312394-333328393 D +
NCBI
AT_rich
AT_rich
(TCTA)n
(TAG)n