bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000156588
Representative transcript
genome : 245,094,499 - 245,103,829 (9,331)
query : 1 - 3,199 (3,199/3,199)
20 exons
identity = 0.995
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000054076
Pan
sp. (Chimpanzee) : XM_512382
Pongo
sp. (Orangutan) : ENSPPYT00000011145
Macaca
sp. (Macaque) : XM_001103344
Mus
sp. (Mouse) : AK005012
Rattus
sp. (Rat) : L25605
Canis
sp. (Dog) : XM_862940
Equus
sp. (Horse) : ENSECAT00000024625
Bos
sp. (Cow) : BC146259
Monodelphis
sp. (Opossum) : XM_001363008
Gallus
sp. (Chicken) : XR_027041
Danio
sp. (Zebrafish) : BC097134
Danio
sp. (Zebrafish) : ENSDART00000100167
Oryzias
sp. (Medaka) : ENSORLT00000008601
Tetraodon
sp. (Tetraodon) : GSTENT00026324001
Takifugu
sp. (Fugu) : SINFRUT00000150605
SINFRUT00000156582
Representative transcript
genome : 245,105,978 - 245,106,610 (633)
query : 1 - 357 (357/357)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000220119
Macaca
sp. (Macaque) : XM_001089604
Mus
sp. (Mouse) : AK144193
Rattus
sp. (Rat) : Z36980
Canis
sp. (Dog) : XM_843621
Equus
sp. (Horse) : XM_001489369
Bos
sp. (Cow) : BC142376
Gallus
sp. (Chicken) : AJ719424
H.sapiens
(Human) : HIT000285213
Pongo
sp. (Orangutan) : ENSPPYT00000023257
Monodelphis
sp. (Opossum) : ENSMODT00000019013
Oryzias
sp. (Medaka) : ENSORLT00000013761
H.sapiens
(Human) : pHIT000036841
Pan
sp. (Chimpanzee) : XM_001170336
SINFRUT00000176260
Representative transcript
genome : 245,109,646 - 245,111,642 (1,997)
query : 1 - 456 (456/456)
5 exons
identity = 0.996
5'(1.000;1.000;0.988;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000086112
Pan
sp. (Chimpanzee) : XM_001155112
Pongo
sp. (Orangutan) : ENSPPYT00000008159
Macaca
sp. (Macaque) : XM_001086038
Mus
sp. (Mouse) : AK020614
Rattus
sp. (Rat) : XM_001060664
Canis
sp. (Dog) : XM_849105
Equus
sp. (Horse) : XM_001497075
Bos
sp. (Cow) : BC122777
Monodelphis
sp. (Opossum) : XM_001365385
Gallus
sp. (Chicken) : BX933195
Danio
sp. (Zebrafish) : BC152082
Tetraodon
sp. (Tetraodon) : GSTENT00006274001
SINFRUT00000167165
Representative transcript
genome : 245,112,560 - 245,116,237 (3,678)
query : 1 - 2,142 (2,142/2,142)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
SINFRUT00000156579
Representative transcript
genome : 245,117,118 - 245,119,530 (2,413)
query : 1 - 999 (999/999)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
scaffold_194
245102644-245118643 D +
NCBI
Maui
Maui
AT_rich
HP_FR1
SINE_FR1c
GC_rich
(TCC)n