bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000148152
Representative transcript
genome : 233,902,666 - 233,912,578 (9,913)
query : 1 - 5,007 (5,007/5,007)
26 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;0.963;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000058813
Pan
sp. (Chimpanzee) : XR_023600
Pongo
sp. (Orangutan) : ENSPPYT00000016191
Macaca
sp. (Macaque) : XM_001100428
Mus
sp. (Mouse) : BC059902
Rattus
sp. (Rat) : AF077000
Canis
sp. (Dog) : XM_846437
Equus
sp. (Horse) : XM_001495506
Bos
sp. (Cow) : BC120008
Monodelphis
sp. (Opossum) : ENSMODT00000018000
Danio
sp. (Zebrafish) : NM_001044928
Danio
sp. (Zebrafish) : XM_001345775
Oryzias
sp. (Medaka) : ENSORLT00000019855
SINFRUT00000148155
Representative transcript
genome : 233,914,633 - 233,924,557 (9,925)
query : 1 - 4,287 (4,287/4,287)
17 exons
identity = 0.994
3'(1.000;0.983)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000042334
Pan
sp. (Chimpanzee) : XR_023610
Pongo
sp. (Orangutan) : ENSPPYT00000016190
Macaca
sp. (Macaque) : XM_001100342
Mus
sp. (Mouse) : AK150275
Rattus
sp. (Rat) : BC131852
Canis
sp. (Dog) : XM_541898
Equus
sp. (Horse) : XM_001499841
Bos
sp. (Cow) : ENSBTAT00000020961
Monodelphis
sp. (Opossum) : ENSMODT00000018026
Gallus
sp. (Chicken) : CR386838
Danio
sp. (Zebrafish) : ENSDART00000058590
Oryzias
sp. (Medaka) : ENSORLT00000019870
Tetraodon
sp. (Tetraodon) : GSTENT00006835001
scaffold_175
233899622-233915621 D +
NCBI
CT-rich
CT-rich
CT-rich
CT-rich
(CAT)n
(CA)n
(TG)n
CT-rich
(CACG)n
(GAA)n