bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.rubripes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
SINFRUT00000160018
Representative transcript
genome : 184,734,300 - 184,736,389 (2,090)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000032335
Pan
sp. (Chimpanzee) : XM_511345
Pongo
sp. (Orangutan) : ENSPPYT00000009447
Macaca
sp. (Macaque) : XM_001103765
Mus
sp. (Mouse) : AK077600
Rattus
sp. (Rat) : XM_001076426
Canis
sp. (Dog) : XM_859742
Equus
sp. (Horse) : XM_001488637
Bos
sp. (Cow) : BC140623
Monodelphis
sp. (Opossum) : XM_001364092
Gallus
sp. (Chicken) : AJ719800
Danio
sp. (Zebrafish) : BC067587
Oryzias
sp. (Medaka) : ENSORLT00000014429
Tetraodon
sp. (Tetraodon) : CR700778
SINFRUT00000175159
Representative transcript
genome : 184,739,125 - 184,745,653 (6,529)
query : 1 - 2,274 (2,274/2,274)
19 exons
identity = 0.994
3'(1.000;0.985;1.000;1.000;1.000;1.000;0.948;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000035923
Pan
sp. (Chimpanzee) : XM_001159424
Pongo
sp. (Orangutan) : ENSPPYT00000008200
Macaca
sp. (Macaque) : ENSMMUT00000039670
Mus
sp. (Mouse) : AK030444
Rattus
sp. (Rat) : Z67744
Canis
sp. (Dog) : ENSCAFT00000031114
Equus
sp. (Horse) : XM_001497659
Bos
sp. (Cow) : DQ073465
Monodelphis
sp. (Opossum) : ENSMODT00000020579
Gallus
sp. (Chicken) : AJ719874
Danio
sp. (Zebrafish) : BC125873
Oryzias
sp. (Medaka) : ENSORLT00000016249
Tetraodon
sp. (Tetraodon) : GSTENT00021880001
SINFRUT00000160020
Representative transcript
genome : 184,749,865 - 184,752,385 (2,521)
query : 1 - 1,428 (1,428/1,428)
7 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000081962
Pan
sp. (Chimpanzee) : XM_528524
Pongo
sp. (Orangutan) : ENSPPYT00000023044
Macaca
sp. (Macaque) : XM_001118379
Mus
sp. (Mouse) : AK089246
Rattus
sp. (Rat) : XM_001075269
Canis
sp. (Dog) : ENSCAFT00000031452
Bos
sp. (Cow) : BT029789
Monodelphis
sp. (Opossum) : ENSMODT00000016544
Gallus
sp. (Chicken) : XM_423637
Danio
sp. (Zebrafish) : XM_684000
Oryzias
sp. (Medaka) : ENSORLT00000016156
Tetraodon
sp. (Tetraodon) : GSTENT00021878001
scaffold_112
184734389-184750388 D +
NCBI
(TG)n
AT_rich
AT_rich