bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.nigroviridis
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
CR718291
genome : 20,965,830 - 21,843,036 (877,207)
query : 1 - 574 (574/574)
4 exons
identity = 0.979
3'()5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR669972
genome : 21,556,167 - 21,721,913 (165,747)
query : 1 - 186 (186/186)
3 exons
identity = 0.989
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR710859
genome : 21,556,187 - 21,722,419 (166,233)
query : 1 - 768 (768/768)
4 exons
identity = 0.973
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR666103
genome : 21,556,220 - 21,722,364 (166,145)
query : 1 - 643 (643/643)
5 exons
identity = 0.968
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR708034
genome : 21,556,340 - 21,722,367 (166,028)
query : 1 - 655 (655/655)
3 exons
identity = 0.986
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR710572
genome : 21,556,389 - 21,722,367 (165,979)
query : 1 - 624 (624/624)
3 exons
identity = 0.978
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR717413
genome : 21,556,389 - 21,722,367 (165,979)
query : 1 - 510 (510/510)
4 exons
identity = 0.992
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR717818
genome : 21,556,389 - 21,722,367 (165,979)
query : 1 - 510 (510/510)
4 exons
identity = 0.992
5'()3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
GSTENT00039005226
Representative transcript
genome : 21,698,597 - 21,698,811 (215)
query : 1 - 215 (215/215)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR719071
Representative transcript
genome : 21,700,865 - 21,701,369 (505)
query : 1 - 505 (505/505)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
GSTENT00004863001
Representative transcript
genome : 21,702,158 - 21,709,493 (7,336)
query : 1 - 2,742 (2,742/2,742)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000001000
Pan
sp. (Chimpanzee) : XM_001156541
Pongo
sp. (Orangutan) : ENSPPYT00000017498
Macaca
sp. (Macaque) : XM_001104977
Mus
sp. (Mouse) : BC125523
Rattus
sp. (Rat) : XM_001070717
Canis
sp. (Dog) : XM_843557
Equus
sp. (Horse) : ENSECAT00000012475
Bos
sp. (Cow) : XM_597589
Monodelphis
sp. (Opossum) : ENSMODT00000015458
Gallus
sp. (Chicken) : ENSGALT00000016536
Danio
sp. (Zebrafish) : XM_001345962
Oryzias
sp. (Medaka) : ENSORLT00000009887
Takifugu
sp. (Fugu) : SINFRUT00000135225
GSTENT00004862001
genome : 21,709,927 - 21,711,625 (1,699)
query : 1 - 1,250 (1,250/1,250)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR645494
Representative transcript
genome : 21,710,818 - 21,711,625 (808)
query : 1 - 563 (563/563)
4 exons
identity = 0.989
3'(0.989;1.000;0.977;0.988)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
GSTENT00004861001
Representative transcript
genome : 21,711,976 - 21,715,264 (3,289)
query : 1 - 1,276 (1,276/1,276)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000433595
Pan
sp. (Chimpanzee) : XM_001154910
Pongo
sp. (Orangutan) : ENSPPYT00000017666
Macaca
sp. (Macaque) : XR_009988
Mus
sp. (Mouse) : AF072376
Rattus
sp. (Rat) : Z50144
Canis
sp. (Dog) : XM_543185
Equus
sp. (Horse) : XM_001498966
Bos
sp. (Cow) : BC109974
Bos
sp. (Cow) : XM_598886
Monodelphis
sp. (Opossum) : ENSMODT00000039936
Monodelphis
sp. (Opossum) : XM_001380339
Gallus
sp. (Chicken) : ENSGALT00000015723
Danio
sp. (Zebrafish) : XM_681142
Oryzias
sp. (Medaka) : ENSORLT00000009933
Takifugu
sp. (Fugu) : SINFRUT00000135224
SCAF7620
21697825-21713824 W -
U3
tRNA-Asn-AAC
tRNA-Asn-AAC
tRNA-Asn-AAC
tRNA-Asn-AAC
(CAT)n
(TCCC)n