bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.nigroviridis
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
CR700204
genome : 81 - 883 (803)
query : 1 - 801 (801/801)
1 exon
identity = 0.966
5'(0.966)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR711223
Representative transcript
genome : 113 - 926 (814)
query : 1 - 814 (814/814)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
GSTENT00007427001
genome : 545 - 649 (105)
query : 1 - 105 (105/105)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR694951
genome : 1,089 - 1,757 (669)
query : 1 - 670 (670/670)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR709453
genome : 1,090 - 1,632 (543)
query : 1 - 543 (543/543)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR692915
genome : 1,092 - 1,533 (442)
query : 1 - 442 (442/442)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR719434
genome : 1,093 - 1,903 (811)
query : 1 - 811 (811/811)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR652952
genome : 1,093 - 1,632 (540)
query : 1 - 540 (540/540)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR666390
genome : 1,103 - 1,634 (532)
query : 1 - 530 (530/530)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR699934
genome : 1,131 - 1,632 (502)
query : 1 - 502 (502/502)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR684359
genome : 1,151 - 2,310 (1,160)
query : 1 - 1,158 (1,158/1,158)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR685653
genome : 1,151 - 2,310 (1,160)
query : 1 - 1,163 (1,163/1,163)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR715147
genome : 1,151 - 1,905 (755)
query : 1 - 755 (755/755)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR688806
genome : 1,178 - 2,729 (1,552)
query : 1 - 1,551 (1,551/1,551)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR631325
genome : 1,184 - 1,634 (451)
query : 1 - 451 (451/451)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR631466
genome : 1,184 - 1,634 (451)
query : 1 - 451 (451/451)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR631512
genome : 1,184 - 1,634 (451)
query : 1 - 451 (451/451)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR632109
genome : 1,184 - 1,634 (451)
query : 1 - 451 (451/451)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR632863
genome : 1,184 - 1,634 (451)
query : 1 - 451 (451/451)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR633006
genome : 1,184 - 1,634 (451)
query : 1 - 451 (451/451)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR700274
Representative transcript
genome : 1,197 - 2,766 (1,570)
query : 1 - 1,568 (1,568/1,568)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR700241
genome : 1,281 - 2,738 (1,458)
query : 1 - 1,468 (1,468/1,468)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR695614
genome : 1,307 - 2,650 (1,344)
query : 1 - 1,341 (1,341/1,341)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR701888
genome : 1,310 - 1,634 (325)
query : 1 - 325 (325/325)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR690833
genome : 1,321 - 2,632 (1,312)
query : 1 - 1,312 (1,312/1,312)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR714762
genome : 1,513 - 2,307 (795)
query : 1 - 794 (794/794)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR698263
genome : 1,612 - 2,749 (1,138)
query : 1 - 1,142 (1,142/1,142)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR721563
genome : 1,631 - 2,310 (680)
query : 1 - 680 (680/680)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR702414
genome : 1,661 - 2,704 (1,044)
query : 1 - 1,046 (1,046/1,046)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR687553
genome : 1,733 - 2,768 (1,036)
query : 1 - 1,034 (1,034/1,034)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR693181
genome : 1,735 - 2,765 (1,031)
query : 1 - 1,028 (1,028/1,028)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR732204
genome : 1,740 - 2,754 (1,015)
query : 1 - 1,014 (1,014/1,014)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR696734
genome : 1,793 - 2,750 (958)
query : 1 - 956 (956/956)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR700793
genome : 1,956 - 2,763 (808)
query : 1 - 808 (808/808)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR640963
genome : 2,032 - 2,650 (619)
query : 1 - 619 (619/619)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR641063
genome : 2,032 - 2,650 (619)
query : 1 - 619 (619/619)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR705964
genome : 2,082 - 2,729 (648)
query : 1 - 648 (648/648)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR713191
genome : 2,112 - 2,633 (522)
query : 1 - 522 (522/522)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR658761
genome : 2,252 - 2,759 (508)
query : 1 - 509 (509/509)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR720712
genome : 2,274 - 2,763 (490)
query : 1 - 490 (490/490)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR685325
genome : 2,282 - 2,763 (482)
query : 1 - 482 (482/482)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR681653
Representative transcript
genome : 3,000 - 3,815 (816)
query : 1 - 816 (816/816)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR642671
genome : 3,199 - 3,815 (617)
query : 1 - 617 (617/617)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR691051
genome : 3,232 - 3,815 (584)
query : 1 - 584 (584/584)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR695137
genome : 3,302 - 3,815 (514)
query : 1 - 514 (514/514)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR632843
genome : 3,369 - 3,815 (447)
query : 1 - 447 (447/447)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR633056
genome : 3,369 - 3,815 (447)
query : 1 - 447 (447/447)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR631839
genome : 3,369 - 3,814 (446)
query : 1 - 446 (446/446)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR701898
Representative transcript
genome : 4,026 - 5,071 (1,046)
query : 1 - 1,047 (1,047/1,047)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000216635
Pan
sp. (Chimpanzee) : ENSPTRT00000054824
Pongo
sp. (Orangutan) : ENSPPYT00000024428
Macaca
sp. (Macaque) : ENSMMUT00000038280
Mus
sp. (Mouse) : AK167184
Rattus
sp. (Rat) : ENSRNOT00000040993
Canis
sp. (Dog) : ENSCAFT00000034824
Bos
sp. (Cow) : ENSBTAT00000042524
Gallus
sp. (Chicken) : ENSGALT00000029098
Danio
sp. (Zebrafish) : BC142870
CR696827
genome : 4,031 - 5,071 (1,041)
query : 1 - 1,041 (1,041/1,041)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR687676
genome : 4,032 - 5,048 (1,017)
query : 1 - 1,017 (1,017/1,017)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR700864
genome : 4,034 - 5,060 (1,027)
query : 1 - 1,027 (1,027/1,027)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR688414
genome : 4,043 - 5,071 (1,029)
query : 1 - 1,028 (1,028/1,028)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR686374
genome : 4,052 - 5,069 (1,018)
query : 1 - 1,016 (1,016/1,016)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR686579
genome : 4,067 - 5,071 (1,005)
query : 1 - 1,005 (1,005/1,005)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR699662
genome : 4,078 - 5,071 (994)
query : 1 - 995 (995/995)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR689443
genome : 4,078 - 5,052 (975)
query : 1 - 975 (975/975)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR703498
genome : 4,081 - 5,071 (991)
query : 1 - 991 (991/991)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR697870
genome : 4,092 - 5,071 (980)
query : 1 - 980 (980/980)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR681302
genome : 4,176 - 5,060 (885)
query : 1 - 885 (885/885)
1 exon
identity = 0.964
5'(0.964)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR644212
genome : 4,192 - 4,565 (374)
query : 1 - 375 (375/375)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR685263
genome : 4,312 - 5,071 (760)
query : 1 - 758 (758/758)
1 exon
identity = 0.961
5'(0.961)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR647654
genome : 4,410 - 5,071 (662)
query : 1 - 662 (662/662)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR685465
genome : 4,552 - 5,071 (520)
query : 1 - 520 (520/520)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR691904
Representative transcript
genome : 5,453 - 5,680 (228)
query : 1 - 228 (228/228)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR694338
genome : 5,453 - 5,680 (228)
query : 1 - 228 (228/228)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR694572
genome : 5,464 - 5,680 (217)
query : 1 - 217 (217/217)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR704060
genome : 5,471 - 5,680 (210)
query : 1 - 210 (210/210)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR631259
genome : 8,916 - 9,543 (628)
query : 1 - 629 (629/629)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR632309
Representative transcript
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR632422
genome : 8,916 - 9,543 (628)
query : 1 - 629 (629/629)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR632890
genome : 8,916 - 9,543 (628)
query : 1 - 629 (629/629)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR649801
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR649895
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR656803
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR686115
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR687344
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR691827
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.978
5'(0.978)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR691836
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR698755
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR699534
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR714043
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR720431
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR722334
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR734540
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.979
5'(0.979)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR734717
genome : 8,916 - 9,543 (628)
query : 1 - 628 (628/628)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR700827
genome : 8,916 - 9,396 (481)
query : 1 - 481 (481/481)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR696380
genome : 9,004 - 9,543 (540)
query : 1 - 540 (540/540)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR643405
genome : 9,017 - 9,543 (527)
query : 1 - 527 (527/527)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR681806
genome : 9,018 - 9,543 (526)
query : 1 - 526 (526/526)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR681977
genome : 9,021 - 9,543 (523)
query : 1 - 523 (523/523)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR682438
genome : 9,029 - 9,543 (515)
query : 1 - 515 (515/515)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR652724
genome : 9,097 - 9,543 (447)
query : 1 - 447 (447/447)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR704996
genome : 9,219 - 9,543 (325)
query : 1 - 325 (325/325)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR691338
Representative transcript
genome : 11,962 - 12,896 (935)
query : 1 - 932 (932/932)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
CR714914
genome : 12,245 - 12,669 (425)
query : 1 - 425 (425/425)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Contig
1-16000 F +