bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
T.nigroviridis
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
GSTENT00015044001
genome : 2,728,690 - 2,732,908 (4,219)
query : 1 - 1,820 (1,820/1,820)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR691802
Representative transcript
genome : 2,728,690 - 2,732,889 (4,200)
query : 1 - 1,792 (1,792/1,792)
17 exons
identity = 0.972
5'(0.991;0.990;0.961;0.972;1.000;0.983;0.974;
0.988;0.986;0.958;0.855;0.947;0.983;1.000;
0.993;0.976;0.962)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000063204
Pan
sp. (Chimpanzee) : XR_025177
Pongo
sp. (Orangutan) : ENSPPYT00000008144
Macaca
sp. (Macaque) : XM_001083719
Mus
sp. (Mouse) : AK080707
Rattus
sp. (Rat) : U32438
Canis
sp. (Dog) : ENSCAFT00000036929
Equus
sp. (Horse) : ENSECAT00000026747
Bos
sp. (Cow) : BC118186
Monodelphis
sp. (Opossum) : XM_001372334
Gallus
sp. (Chicken) : XM_001231807
Danio
sp. (Zebrafish) : BC154045
Oryzias
sp. (Medaka) : ENSORLT00000012210
Takifugu
sp. (Fugu) : SINFRUT00000140926
CR694467
genome : 2,731,330 - 2,732,908 (1,579)
query : 1 - 983 (983/983)
6 exons
identity = 0.985
5'(0.986;1.000;1.000;0.993;1.000;0.973)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
GSTENT00015043001
Representative transcript
genome : 2,734,465 - 2,737,721 (3,257)
query : 1 - 2,484 (2,484/2,484)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000016690
Pan
sp. (Chimpanzee) : XM_510709
Pongo
sp. (Orangutan) : ENSPPYT00000008148
Macaca
sp. (Macaque) : XM_001118461
Mus
sp. (Mouse) : AB045293
Rattus
sp. (Rat) : XM_001061336
Canis
sp. (Dog) : XM_537022
Equus
sp. (Horse) : XM_001915417
Bos
sp. (Cow) : BC146051
Monodelphis
sp. (Opossum) : XM_001372542
Gallus
sp. (Chicken) : ENSGALT00000012079
Danio
sp. (Zebrafish) : XM_001920332
Oryzias
sp. (Medaka) : ENSORLT00000012225
Takifugu
sp. (Fugu) : SINFRUT00000140924
GSTENT00015042001
Representative transcript
genome : 2,739,252 - 2,753,303 (14,052)
query : 1 - 2,175 (2,175/2,175)
11 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
SCAF14542
2728093-2744092 W -
(TA)n
AT_rich
(TG)n
(CA)n
(CA)n
(TG)n
(CA)n
(TG)n
(TG)n
(CA)n
(CA)n
(TGGGGG)n