bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
R.norvegicus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001067577
genome : 35,230,297 - 35,280,568 (50,272)
query : 1 - 2,404 (2,404/2,404)
14 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001072518
genome : 35,230,297 - 35,280,568 (50,272)
query : 1 - 2,404 (2,404/2,404)
14 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AY248698
Representative transcript
genome : 35,243,587 - 35,280,561 (36,975)
query : 1 - 2,361 (2,361/2,361)
13 exons
identity = 0.996
5'(1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000022622
genome : 35,243,587 - 35,280,561 (36,975)
query : 1 - 2,374 (2,374/2,374)
13 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
BC087585
Representative transcript
genome : 35,284,039 - 35,287,705 (3,667)
query : 1 - 978 (978/1,000)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000272738
Pongo
sp. (Orangutan) : ENSPPYT00000008765
Macaca
sp. (Macaque) : ENSMMUT00000013725
Mus
sp. (Mouse) : AK155018
Canis
sp. (Dog) : XM_859393
Equus
sp. (Horse) : ENSECAT00000007216
Monodelphis
sp. (Opossum) : ENSMODT00000007505
Gallus
sp. (Chicken) : XM_424853
Danio
sp. (Zebrafish) : BC062530
Oryzias
sp. (Medaka) : ENSORLT00000000404
Tetraodon
sp. (Tetraodon) : GSTENT00034086001
Takifugu
sp. (Fugu) : SINFRUT00000145212
NM_001009639
genome : 35,284,039 - 35,287,705 (3,667)
query : 1 - 978 (978/1,000)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000022863
genome : 35,284,039 - 35,287,705 (3,667)
query : 1 - 978 (978/978)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AY886520
Representative transcript
genome : 35,288,675 - 35,307,783 (19,109)
query : 18 - 1,903 (1,886/1,921)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000039302
Pan
sp. (Chimpanzee) : XM_001163395
Pongo
sp. (Orangutan) : ENSPPYT00000008766
Macaca
sp. (Macaque) : ENSMMUT00000013728
Mus
sp. (Mouse) : AK038593
Canis
sp. (Dog) : XM_536817
Equus
sp. (Horse) : XM_001496451
Bos
sp. (Cow) : BC110196
Monodelphis
sp. (Opossum) : XM_001372994
Gallus
sp. (Chicken) : ENSGALT00000040183
Danio
sp. (Zebrafish) : XM_685994
Tetraodon
sp. (Tetraodon) : GSTENT00019358001
Takifugu
sp. (Fugu) : SINFRUT00000153544
NM_001039099
genome : 35,288,675 - 35,307,783 (19,109)
query : 18 - 1,903 (1,886/1,921)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000022916
genome : 35,288,683 - 35,300,185 (11,503)
query : 1 - 1,611 (1,611/1,611)
10 exons
identity = 0.997
3'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AABR03113805.1
35278229-35310521 W +
50
35310522-35310571 N
AABR03114422.1
35310572-35318228 W +