bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
R.norvegicus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC088313
Representative transcript
genome : 17,193,505 - 17,241,548 (48,044)
query : 1 - 1,615 (1,615/1,639)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000031695
Pan
sp. (Chimpanzee) : XM_531394
Pongo
sp. (Orangutan) : CR860254
Macaca
sp. (Macaque) : XM_001107115
Mus
sp. (Mouse) : BC016457
Canis
sp. (Dog) : AF109645
Equus
sp. (Horse) : XM_001497763
Bos
sp. (Cow) : BC102845
Monodelphis
sp. (Opossum) : XM_001369028
Gallus
sp. (Chicken) : XM_416681
Danio
sp. (Zebrafish) : BC045286
Oryzias
sp. (Medaka) : ENSORLT00000015597
Tetraodon
sp. (Tetraodon) : GSTENT00007571001
Takifugu
sp. (Fugu) : SINFRUT00000162907
NM_053570
genome : 17,193,505 - 17,241,548 (48,044)
query : 1 - 1,615 (1,615/1,639)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AF109644
genome : 17,193,576 - 17,227,857 (34,282)
query : 1 - 1,076 (1,076/1,076)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
AF109643
genome : 17,193,576 - 17,227,798 (34,223)
query : 1 - 1,017 (1,017/1,033)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.985
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000050701
genome : 17,216,620 - 17,241,063 (24,444)
query : 1 - 1,020 (1,020/1,020)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000002124
genome : 17,216,620 - 17,227,879 (11,260)
query : 1 - 1,059 (1,059/1,059)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AF087037
genome : 17,241,627 - 17,257,740 (16,114)
query : 9 - 1,236 (1,228/1,259)
5 exons
identity = 0.985
3'(0.976;0.995;0.993;0.994)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
NM_019290
genome : 17,241,627 - 17,257,740 (16,114)
query : 9 - 1,236 (1,228/1,259)
5 exons
identity = 0.985
3'(0.976;0.995;0.993;0.994)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
BC127498
Representative transcript
genome : 17,241,630 - 17,257,841 (16,212)
query : 1 - 1,323 (1,323/1,347)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000035565
Pan
sp. (Chimpanzee) : XM_001170879
Pongo
sp. (Orangutan) : ENSPPYT00000013118
Macaca
sp. (Macaque) : XM_001106583
Mus
sp. (Mouse) : AK144415
Canis
sp. (Dog) : XM_544819
Equus
sp. (Horse) : ENSECAT00000025612
Bos
sp. (Cow) : BC102529
Danio
sp. (Zebrafish) : BC053242
Oryzias
sp. (Medaka) : ENSORLT00000015604
Takifugu
sp. (Fugu) : SINFRUT00000160614
ENSRNOT00000002121
genome : 17,241,625 - 17,257,740 (16,116)
query : 1 - 1,227 (1,227/1,227)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AABR03079390.1
17177526-17199508 W +
50
17199509-17199558 N
AABR03078554.1
17199559-17256833 W +
416
17256834-17257249 N
AABR03081608.1
17257250-17257525 W +