bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
R.norvegicus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSRNOT00000062017
Representative transcript
genome : 3,194,109 - 3,306,796 (112,688)
query : 1 - 4,887 (4,887/4,887)
47 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000000078
Pan
sp. (Chimpanzee) : XR_022885
Macaca
sp. (Macaque) : XR_011266
Mus
sp. (Mouse) : EF591876
Canis
sp. (Dog) : XM_536294
Equus
sp. (Horse) : XM_001918332
Bos
sp. (Cow) : XM_613739
Monodelphis
sp. (Opossum) : XM_001364919
Gallus
sp. (Chicken) : XM_424706
Danio
sp. (Zebrafish) : XM_685671
Oryzias
sp. (Medaka) : ENSORLT00000012936
Takifugu
sp. (Fugu) : SINFRUT00000140442
XM_001059136
genome : 3,196,865 - 3,307,075 (110,211)
query : 1 - 4,971 (4,971/4,971)
38 exons
identity = 0.969
5'(0.717;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_226606
genome : 3,196,865 - 3,306,796 (109,932)
query : 1 - 4,416 (4,416/4,416)
38 exons
identity = 0.997
5'(0.939;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000036547
Representative transcript
genome : 3,327,564 - 3,426,825 (99,262)
query : 1 - 1,314 (1,314/1,314)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.981)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000429111
Pan
sp. (Chimpanzee) : XM_517651
Pongo
sp. (Orangutan) : ENSPPYT00000018189
Macaca
sp. (Macaque) : ENSMMUT00000014873
Mus
sp. (Mouse) : ENSMUST00000109592
Canis
sp. (Dog) : ENSCAFT00000012696
Equus
sp. (Horse) : XM_001503706
Bos
sp. (Cow) : BC122751
Monodelphis
sp. (Opossum) : ENSMODT00000025573
Gallus
sp. (Chicken) : XM_429122
Danio
sp. (Zebrafish) : ENSDART00000050979
XM_001059199
genome : 3,327,645 - 3,426,429 (98,785)
query : 1 - 1,209 (1,209/1,209)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_226608
genome : 3,327,645 - 3,401,619 (73,975)
query : 1 - 1,104 (1,104/1,104)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSRNOT00000062009
Representative transcript
genome : 3,426,470 - 3,426,649 (180)
query : 1 - 171 (171/171)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AABR03017240.1
3297194-3301593 W +
100
3301594-3301693 N
AABR03012181.1
3301694-3436619 W +
50
3436620-3436669 N
AABR03013866.1
3436670-3457193 W +