bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.troglodytes
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_524815
Representative transcript
genome : 120,560,171 - 120,594,557 (34,387)
query : 1 - 3,167 (3,167/3,167)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000492861
Pongo
sp. (Orangutan) : ENSPPYT00000001177
Macaca
sp. (Macaque) : XM_001112908
Mus
sp. (Mouse) : AM849328
Rattus
sp. (Rat) : XM_227554
Canis
sp. (Dog) : XM_533019
Equus
sp. (Horse) : ENSECAT00000017967
Bos
sp. (Cow) : XM_586610
Monodelphis
sp. (Opossum) : ENSMODT00000006414
Gallus
sp. (Chicken) : XM_416661
Danio
sp. (Zebrafish) : BC076538
Oryzias
sp. (Medaka) : ENSORLT00000022362
Tetraodon
sp. (Tetraodon) : GSTENT00026046001
Takifugu
sp. (Fugu) : SINFRUT00000137312
ENSPTRT00000002160
genome : 120,560,171 - 120,594,495 (34,325)
query : 1 - 3,105 (3,105/3,105)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001145958
Representative transcript
genome : 120,562,273 - 120,569,545 (7,273)
query : 1 - 624 (624/624)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000044202
HIT000044202
(
AK124329
)
genome : 120,532,279 - 120,570,363 (38,085)
query : 1 - 1,813 (1,813/1,813)
4 exons
identity = 0.985
5'(0.987;0.989)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000326949
(
Z33642
)
genome : 120,560,171 - 120,594,495 (34,325)
query : 16 - 3,120 (3,105/3,340)
9 exons
identity = 0.987
3'(0.975;0.992;0.983;0.980;0.995;0.990;0.998;
0.982;0.980)5'
coverage = 0.930
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig119.201
120557364-120557837 W -
704
120557838-120558541 N
Contig119.200
120558542-120560737 W -
682
120560738-120561419 N
Contig119.199
120561420-120564424 W -
594
120564425-120565018 N
Contig119.198
120565019-120584708 W -
364
120584709-120585072 N
Contig119.197
120585073-120596530 W -
743
120596531-120597273 N
Contig119.196
120597274-120597363 W -