bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
CR857749
Representative transcript
genome : 19,499,727 - 19,623,563 (123,837)
query : 1 - 1,479 (1,479/1,494)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000242643
Pan
sp. (Chimpanzee) : XM_001147059
Macaca
sp. (Macaque) : XM_001086734
Mus
sp. (Mouse) : AK080625
Rattus
sp. (Rat) : AY040223
Canis
sp. (Dog) : XM_855325
Equus
sp. (Horse) : XM_001488972
Bos
sp. (Cow) : AF480862
Monodelphis
sp. (Opossum) : ENSMODT00000010314
Gallus
sp. (Chicken) : AJ720266
Danio
sp. (Zebrafish) : BC121722
Oryzias
sp. (Medaka) : ENSORLT00000016362
Tetraodon
sp. (Tetraodon) : CR701524
Takifugu
sp. (Fugu) : SINFRUT00000145706
NM_001131484
genome : 19,499,727 - 19,623,563 (123,837)
query : 1 - 1,479 (1,479/1,494)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000006147
genome : 19,499,723 - 19,623,563 (123,841)
query : 1 - 1,483 (1,483/1,483)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000007315
(
AK024041
)
genome : 19,499,728 - 19,623,563 (123,836)
query : 1 - 1,478 (1,478/1,478)
8 exons
identity = 0.980
3'(0.974;0.972;0.981;0.979;0.988;0.976;1.000;
0.990)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000066833
(
AF085954
)
genome : 19,531,786 - 19,532,293 (508)
query : 1 - 508 (508/517)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig366.86
19481645-19495054 W -
10
19495055-19495064 N
Contig366.85
19495065-19503020 W -
368
19503021-19503388 N
Contig366.84
19503389-19530328 W -
369
19530329-19530697 N
Contig366.83
19530698-19550604 W -
80
19550605-19550684 N
Contig366.82
19550685-19553393 W -
769
19553394-19554162 N
Contig366.81
19554163-19555590 W -
10
19555591-19555600 N
Contig366.80
19555601-19571631 W -
989
19571632-19572620 N
Contig366.79
19572621-19576994 W -
317
19576995-19577311 N
Contig366.78
19577312-19580645 W -
10
19580646-19580655 N
Contig366.77
19580656-19588985 W -
1298
19588986-19590283 N
Contig366.76
19590284-19592631 W -
10
19592632-19592641 N
Contig366.75
19592642-19594307 W -
331
19594308-19594638 N
Contig366.74
19594639-19613537 W -
10
19613538-19613547 N
Contig366.73
19613548-19616545 W -
555
19616546-19617100 N
Contig366.72
19617101-19641644 W -