bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSPPYT00000005037
Representative transcript
genome : 9,121,451 - 9,121,997 (547)
query : 1 - 543 (543/543)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR861207
Representative transcript
genome : 9,124,831 - 9,181,130 (56,300)
query : 1 - 4,603 (4,603/4,623)
36 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000306372
Pan
sp. (Chimpanzee) : XM_001139728
Macaca
sp. (Macaque) : XM_001114309
Mus
sp. (Mouse) : AY185125
Rattus
sp. (Rat) : J02635
Canis
sp. (Dog) : XM_534893
Equus
sp. (Horse) : ENSECAT00000013620
Bos
sp. (Cow) : BC153840
Monodelphis
sp. (Opossum) : ENSMODT00000022824
Gallus
sp. (Chicken) : XM_416476
Gallus
sp. (Chicken) : X78801
Gallus
sp. (Chicken) : XR_027033
Danio
sp. (Zebrafish) : BC125959
Danio
sp. (Zebrafish) : BC139502
Danio
sp. (Zebrafish) : BC154439
Danio
sp. (Zebrafish) : XM_001345533
Oryzias
sp. (Medaka) : ENSORLT00000000908
Tetraodon
sp. (Tetraodon) : GSTENT00026833001
Takifugu
sp. (Fugu) : SINFRUT00000178049
NM_001133457
genome : 9,124,831 - 9,181,130 (56,300)
query : 1 - 4,603 (4,603/4,623)
36 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000005038
genome : 9,124,828 - 9,181,130 (56,303)
query : 1 - 4,603 (4,603/4,603)
35 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000040481
(
BC028195
)
genome : 9,113,034 - 9,122,195 (9,162)
query : 1 - 2,204 (2,204/2,230)
3 exons
identity = 0.902
3'(0.858;0.963)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000043681
(
AK123808
)
genome : 9,114,987 - 9,122,201 (7,215)
query : 1 - 2,064 (2,064/2,064)
2 exons
identity = 0.940
3'(0.926;0.963)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000013466
(
AK056852
)
genome : 9,122,294 - 9,125,171 (2,878)
query : 1 - 2,187 (2,187/2,187)
3 exons
identity = 0.953
5'(0.922;0.964;0.952)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000021230
(
AK096375
)
genome : 9,123,108 - 9,125,171 (2,064)
query : 1 - 2,063 (2,063/2,063)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000052315
(
BC040071
)
genome : 9,124,824 - 9,181,112 (56,289)
query : 1 - 4,592 (4,592/4,617)
36 exons
identity = 0.982
3'(0.992;1.000;0.981;0.971)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig1096.49
9113724-9117623 W -
144
9117624-9117767 N
Contig1096.48
9117768-9129723 W -
(TG)n
AluJo
L1PB4
(TCTA)n
MIRm
AluJb
(TATG)n
AluJb
AluY
AluSg/x
MER5A
MER5B
AluJo
AluJo
LTR29
(TA)n
(TA)n
(TTATA)n
AluJ/FLAM
LTR81A
MamGypLTR1c
L2c
MIR
MER52D
MER52D
AT_rich
AT_rich
AluJ/FLAM
(TA)n
SVA_A