bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSPPYT00000021323
Representative transcript
genome : 1,326,723 - 1,534,508 (207,786)
query : 1 - 3,060 (3,060/3,060)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000435217
Pan
sp. (Chimpanzee) : XM_519583
Macaca
sp. (Macaque) : AB179068
Mus
sp. (Mouse) : AK032564
Rattus
sp. (Rat) : U67138
Canis
sp. (Dog) : ENSCAFT00000025847
Equus
sp. (Horse) : XM_001495992
Bos
sp. (Cow) : ENSBTAT00000011317
Monodelphis
sp. (Opossum) : XM_001381443
Gallus
sp. (Chicken) : XR_027158
Danio
sp. (Zebrafish) : XM_001336481
Danio
sp. (Zebrafish) : XM_001921429
Danio
sp. (Zebrafish) : ENSDART00000082441
Oryzias
sp. (Medaka) : ENSORLT00000014161
Oryzias
sp. (Medaka) : ENSORLT00000021609
Tetraodon
sp. (Tetraodon) : GSTENT00020312001
Tetraodon
sp. (Tetraodon) : GSTENT00032458001
Takifugu
sp. (Fugu) : SINFRUT00000144836
Takifugu
sp. (Fugu) : SINFRUT00000165712
ENSPPYT00000021324
Representative transcript
genome : 1,606,369 - 1,622,554 (16,186)
query : 1 - 861 (861/861)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000033404
Pan
sp. (Chimpanzee) : XM_001144188
Macaca
sp. (Macaque) : XM_001096359
Mus
sp. (Mouse) : AK089692
Rattus
sp. (Rat) : BC078982
Canis
sp. (Dog) : AJ875419
Equus
sp. (Horse) : ENSECAT00000018063
Bos
sp. (Cow) : ENSBTAT00000011319
Monodelphis
sp. (Opossum) : XM_001381450
Gallus
sp. (Chicken) : AJ851539
Danio
sp. (Zebrafish) : BC154584
Danio
sp. (Zebrafish) : XM_680805
Oryzias
sp. (Medaka) : ENSORLT00000021597
Tetraodon
sp. (Tetraodon) : GSTENT00032457001
Takifugu
sp. (Fugu) : SINFRUT00000144837
ENSPPYT00000021325
Representative transcript
genome : 1,626,841 - 1,631,538 (4,698)
query : 1 - 663 (663/663)
2 exons
identity = 0.990
5'(0.992)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000473985 (
ENST00000388528
)
genome : 1,239,729 - 1,239,797 (69)
query : 1 - 69 (69/69)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000472206 (
ENST00000386509
)
genome : 1,239,729 - 1,239,796 (68)
query : 1 - 68 (68/68)
1 exon
identity = 0.985
5'(0.985)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000473287 (
ENST00000387739
)
genome : 1,239,729 - 1,239,796 (68)
query : 1 - 68 (68/68)
1 exon
identity = 0.956
5'(0.956)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000473430 (
ENST00000387896
)
genome : 1,239,729 - 1,239,796 (68)
query : 1 - 68 (68/68)
1 exon
identity = 0.897
5'(0.897)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000473479 (
ENST00000387954
)
genome : 1,239,729 - 1,239,796 (68)
query : 1 - 68 (68/68)
1 exon
identity = 0.926
5'(0.926)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000070222
(
AF119818
)
genome : 1,326,721 - 1,541,467 (214,747)
query : 1 - 10,132 (10,132/10,141)
12 exons
identity = 0.931
5'(0.970;0.987;0.972;0.973;0.982;0.966;1.000;
0.977;0.978;1.000;0.987;0.912)3'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000018279
(
AK093412
)
genome : 1,442,797 - 1,454,758 (11,962)
query : 1 - 1,810 (1,810/1,810)
5 exons
identity = 0.895
3'(0.891;0.949;0.938;0.891;0.881)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000091044
(
BC025336
)
genome : 1,594,657 - 1,596,905 (2,249)
query : 1 - 2,237 (2,237/2,255)
1 exon
identity = 0.934
3'(0.934)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000033404
(
BC007725
)
genome : 1,606,244 - 1,623,353 (17,110)
query : 35 - 1,819 (1,785/1,837)
2 exons
identity = 0.965
5'(0.981;0.956)3'
coverage = 0.981
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000021591
(
AK096736
)
genome : 1,626,678 - 1,632,304 (5,627)
query : 2 - 1,862 (1,861/1,862)
3 exons
identity = 0.875
5'(0.920)3'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig9320.2
1230615-1239825 W +
3
1239826-1239828 N
Contig7438.3
1239829-1241480 W -
952
1241481-1242432 N
Contig7438.2
1242433-1253937 W -
10
1253938-1253947 N
Contig7438.1
1253948-1268339 W -
789
1268340-1269128 N
Contig9291.3
1269129-1270280 W -
598
1270281-1270878 N
Contig9291.2
1270879-1273506 W -
607
1273507-1274113 N
Contig9291.1
1274114-1287478 W -
2332
1287479-1289810 N
Contig4987.8
1289811-1295240 W -
10
1295241-1295250 N
Contig4987.7
1295251-1296145 W -
10
1296146-1296155 N
Contig4987.6
1296156-1332972 W -
1473
1332973-1334445 N
Contig4987.5
1334446-1335364 W -
10
1335365-1335374 N
Contig4987.4
1335375-1338053 W -
658
1338054-1338711 N
Contig4987.3
1338712-1339425 W -
332
1339426-1339757 N
Contig4987.2
1339758-1343430 W -
1023
1343431-1344453 N
Contig4987.1
1344454-1345942 W -
2183
1345943-1348125 N
Contig7591.4
1348126-1349120 W -
566
1349121-1349686 N
Contig7591.3
1349687-1365807 W -
765
1365808-1366572 N
Contig7591.2
1366573-1375543 W -
1288
1375544-1376831 N
Contig7591.1
1376832-1378696 W -
100
1378697-1378796 N
Contig5594.1
1378797-1391886 W +
256
1391887-1392142 N
Contig5594.2
1392143-1401078 W +
10
1401079-1401088 N
Contig5594.3
1401089-1402147 W +
137
1402148-1402284 N
Contig5594.4
1402285-1404165 W +
10
1404166-1404175 N
Contig5594.5
1404176-1405154 W +
10
1405155-1405164 N
Contig5594.6
1405165-1407837 W +
882
1407838-1408719 N
Contig5594.7
1408720-1412149 W +
326
1412150-1412475 N
Contig5594.8
1412476-1416766 W +
10
1416767-1416776 N
Contig5594.9
1416777-1428909 W +
4471
1428910-1433380 N
Contig2715.1
1433381-1435134 W +
1281
1435135-1436415 N
Contig2715.2
1436416-1491563 W +
10
1491564-1491573 N
Contig2715.3
1491574-1501944 W +
802
1501945-1502746 N
Contig2715.4
1502747-1504471 W +
10
1504472-1504481 N
Contig2715.5
1504482-1538756 W +
185
1538757-1538941 N
Contig2715.6
1538942-1546199 W +
10
1546200-1546209 N
Contig2715.7
1546210-1548460 W +
10
1548461-1548470 N
Contig2715.8
1548471-1559939 W +
10
1559940-1559949 N
Contig2715.9
1559950-1592834 W +
318
1592835-1593152 N
Contig2715.10
1593153-1599707 W +
10
1599708-1599717 N
Contig2715.11
1599718-1610013 W +
1246
1610014-1611259 N
Contig2715.12
1611260-1616680 W +
752
1616681-1617432 N
Contig2715.13
1617433-1619849 W +
100
1619850-1619949 N
Contig25384.1
1619950-1621611 W +
144
1621612-1621755 N
Contig25384.2
1621756-1627741 W +
832
1627742-1628573 N
Contig25384.3
1628574-1629892 W +
100
1629893-1629992 N
Contig22528.1
1629993-1630614 W +