bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSPPYT00000015859
Representative transcript
genome : 55,205,678 - 55,206,181 (504)
query : 1 - 504 (504/504)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000053852
Macaca
sp. (Macaque) : AB171616
Mus
sp. (Mouse) : BC043097
Rattus
sp. (Rat) : XM_001063614
Canis
sp. (Dog) : XM_535549
Equus
sp. (Horse) : ENSECAT00000005235
Bos
sp. (Cow) : XM_611424
Monodelphis
sp. (Opossum) : XM_001363764
Gallus
sp. (Chicken) : XM_001232948
HIT000053852
(
BC052980
)
genome : 55,202,195 - 55,209,105 (6,911)
query : 1 - 4,334 (4,334/4,403)
3 exons
identity = 0.961
3'(0.960;0.980;0.952)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
eHIT000016581 ( ESTsASS_3_927 )
genome : 55,209,638 - 55,286,072 (76,435)
query : 1 - 1,118 (1,118/1,118)
7 exons
identity = 0.995
5'(1.000)3'
coverage = 1.000
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig1169.70
55197929-55213928 W -
AluSc
AT_rich
L1M5
AluY
L1M5
AluY
L2a
AluSq
GA-rich
AT_rich
AT_rich
(CCG)n
(CGG)n
MIR
AT_rich
AT_rich
AT_rich
MER20
L2a
AT_rich
MLT1J