bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
CR858680
Representative transcript
genome : 88,272,669 - 88,280,094 (7,426)
query : 1 - 2,979 (2,979/3,069)
5 exons
identity = 0.998
3'(0.998;0.994;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000436177
Pan
sp. (Chimpanzee) : XM_513957
Macaca
sp. (Macaque) : AB169719
Mus
sp. (Mouse) : DQ346661
Rattus
sp. (Rat) : AF117211
Canis
sp. (Dog) : XM_545783
Equus
sp. (Horse) : ENSECAT00000019554
Monodelphis
sp. (Opossum) : XM_001363415
Gallus
sp. (Chicken) : AY297457
Danio
sp. (Zebrafish) : BC092675
Oryzias
sp. (Medaka) : ENSORLT00000015355
Oryzias
sp. (Medaka) : ENSORLT00000015504
NM_001132037
genome : 88,272,669 - 88,280,094 (7,426)
query : 1 - 2,979 (2,979/3,069)
5 exons
identity = 0.998
3'(0.998;0.994;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000000701
genome : 88,272,669 - 88,280,094 (7,426)
query : 1 - 2,979 (2,979/2,979)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
CR860271
genome : 88,272,877 - 88,280,096 (7,220)
query : 2 - 2,772 (2,771/2,775)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000053725
(
BC051869
)
genome : 88,272,882 - 88,280,067 (7,186)
query : 1 - 2,739 (2,739/2,753)
5 exons
identity = 0.983
3'(0.982;0.994;0.984;0.981;0.993)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000018817
(
AK093959
)
genome : 88,272,880 - 88,280,094 (7,215)
query : 1 - 2,599 (2,599/2,599)
4 exons
identity = 0.983
3'(0.982;0.984;0.981;0.988)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000021059
(
AK096204
)
genome : 88,272,880 - 88,280,092 (7,213)
query : 1 - 3,769 (3,769/3,769)
3 exons
identity = 0.979
3'(0.980;0.964;0.994)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig422.4
88268381-88284380 W +
MIR
L1PA4
Charlie24
(TG)n
(TA)n
L1MA4
MIR3
MIR3
MIRc
L2a
L1PB4
L2a
AT_rich
MER6B
MIR