bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSPPYT00000000383
Representative transcript
genome : 46,734,087 - 46,742,226 (8,140)
query : 1 - 5,578 (5,578/5,578)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000218950
Pan
sp. (Chimpanzee) : ENSPTRT00000042963
Macaca
sp. (Macaque) : AB174642
Mus
sp. (Mouse) : AK037150
Rattus
sp. (Rat) : AF163569
Canis
sp. (Dog) : XM_545678
Equus
sp. (Horse) : ENSECAT00000019131
Bos
sp. (Cow) : BC149945
Monodelphis
sp. (Opossum) : ENSMODT00000001341
Gallus
sp. (Chicken) : XM_418054
Danio
sp. (Zebrafish) : CU468791
Oryzias
sp. (Medaka) : ENSORLT00000019684
Tetraodon
sp. (Tetraodon) : GSTENT00020801001
Takifugu
sp. (Fugu) : SINFRUT00000167889
HIT000084203
(
AY077681
)
genome : 46,715,886 - 46,730,796 (14,911)
query : 1 - 1,359 (1,359/1,359)
8 exons
identity = 0.984
3'(1.000)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000023075
(
AK098245
)
genome : 46,734,049 - 46,736,160 (2,112)
query : 1 - 2,110 (2,110/2,110)
1 exon
identity = 0.954
5'(0.954)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000218950
(
U29089
)
genome : 46,738,241 - 46,750,721 (12,481)
query : 2 - 1,557 (1,556/1,560)
3 exons
identity = 0.977
3'(0.976;0.976)5'
coverage = 0.997
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig335.97
46730156-46732857 W -
10
46732858-46732867 N
Contig335.96
46732868-46742230 W -
30
46742231-46742260 N
Contig335.95
46742261-46746155 W -
AluJb
MER2B
MIR3
L2c
LTR7
L2c
L2b
FLAM_C
AluSx
MIR3
AluSx
MIR3
MIRc
L2c
MIR3
MIRc
MIR
AluY
AluSq
MIR
Charlie15a
MIR3
GA-rich
MamRep4096