bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSPPYT00000000369
Representative transcript
genome : 46,009,170 - 46,013,967 (4,798)
query : 1 - 267 (267/267)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000044518
Pan
sp. (Chimpanzee) : XM_001144120
Macaca
sp. (Macaque) : XM_001098173
Mus
sp. (Mouse) : AY707859
Rattus
sp. (Rat) : AY196983
Canis
sp. (Dog) : XM_843391
Equus
sp. (Horse) : ENSECAT00000007565
Bos
sp. (Cow) : BC111610
Monodelphis
sp. (Opossum) : XM_001370802
Gallus
sp. (Chicken) : XR_026780
Danio
sp. (Zebrafish) : XM_001336349
Oryzias
sp. (Medaka) : ENSORLT00000016083
Tetraodon
sp. (Tetraodon) : GSTENT00029728001
Takifugu
sp. (Fugu) : SINFRUT00000180661
ENSPPYT00000000370
genome : 46,013,169 - 46,013,967 (799)
query : 1 - 102 (102/102)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000000371
Representative transcript
genome : 46,019,549 - 46,021,976 (2,428)
query : 1 - 420 (420/420)
2 exons
identity = 0.995
5'(1.000;0.994)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000274116
Pan
sp. (Chimpanzee) : ENSPTRT00000003428
Macaca
sp. (Macaque) : AY823262
Equus
sp. (Horse) : XM_001489036
Bos
sp. (Cow) : ENSBTAT00000028248
HIT000084483
(
AY117143
)
genome : 46,019,549 - 46,021,998 (2,450)
query : 1 - 438 (438/438)
2 exons
identity = 0.957
5'(0.990;0.947)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig4824.11
46012762-46016847 W +
1462
46016848-46018309 N
Contig335.193
46018310-46022346 W -
98
46022347-46022444 N
Contig335.192
46022445-46026130 W -
30
46026131-46026160 N
Contig335.191
46026161-46028761 W -
MIR
MIRb
AluSx
L2a
(TG)n
L3b
L2b
(CAAAAA)n
MIR
MIRm
L2a
Charlie10
Charlie10
MIRb
MIRb
HAL1
AluSx
HAL1
AluJo
AluSq
HAL1
AluJb
HAL1
HAL1
AluSx