bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
P.abelii
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSPPYT00000001049
genome : 100,269,891 - 100,295,836 (25,946)
query : 9 - 3,406 (3,398/3,406)
11 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000001050
genome : 100,296,539 - 100,301,452 (4,914)
query : 1 - 3,711 (3,711/3,711)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSPPYT00000001051
genome : 100,305,772 - 100,307,492 (1,721)
query : 1 - 450 (450/450)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000244494
(
AJ011122
)
genome : 100,253,824 - 100,295,637 (41,814)
query : 1 - 3,599 (3,599/3,599)
13 exons
identity = 0.962
5'(1.000;1.000;0.978)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000011305
(
AK054691
)
genome : 100,293,657 - 100,295,637 (1,981)
query : 1 - 1,974 (1,974/1,974)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000001156
(
AB037862
)
genome : 100,295,870 - 100,305,389 (9,520)
query : 1 - 5,378 (5,378/5,378)
10 exons
identity = 0.975
3'(0.952;1.000;0.982;0.997;0.988;1.000;0.994;
0.983;0.964;0.964)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000006379
(
AK023105
)
genome : 100,295,870 - 100,300,263 (4,394)
query : 1 - 3,277 (3,277/3,277)
8 exons
identity = 0.976
3'(0.952;0.985;0.957;0.997;0.988;1.000;0.994;
0.989)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000050745
(
BC021024
)
genome : 100,305,772 - 100,307,662 (1,891)
query : 1 - 620 (620/641)
2 exons
identity = 0.977
5'(0.979)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig1631.39
100290995-100290997 W -
636
100290998-100291633 N
Contig1631.38
100291634-100306994 W -
AluSx
AluSx
MIR3
Tigger15a
AT_rich
AluSx
AluSc
AluJb
(CCG)n
AluJb
AluSx
AluY