bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000018500
Representative transcript
genome : 8,699,804 - 8,708,223 (8,420)
query : 1 - 2,066 (2,066/2,066)
17 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000011095
Pan
sp. (Chimpanzee) : XM_518827
Pongo
sp. (Orangutan) : CR858532
Macaca
sp. (Macaque) : AB070116
Mus
sp. (Mouse) : AK155571
Rattus
sp. (Rat) : XM_574308
Canis
sp. (Dog) : ENSCAFT00000000999
Equus
sp. (Horse) : ENSECAT00000013902
Bos
sp. (Cow) : BC109896
Monodelphis
sp. (Opossum) : XM_001371108
Gallus
sp. (Chicken) : XM_419696
Danio
sp. (Zebrafish) : BC054925
Tetraodon
sp. (Tetraodon) : GSTENT00023074001
Takifugu
sp. (Fugu) : SINFRUT00000146965
ENSORLT00000018504
genome : 8,700,276 - 8,708,223 (7,948)
query : 1 - 1,890 (1,890/1,890)
15 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000018507
genome : 8,701,817 - 8,708,139 (6,323)
query : 1 - 1,554 (1,554/1,554)
13 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000018510
genome : 8,704,636 - 8,708,169 (3,534)
query : 1 - 498 (498/498)
5 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000018541
Representative transcript
genome : 8,711,332 - 8,718,240 (6,909)
query : 1 - 1,590 (1,590/1,590)
18 exons
identity = 0.971
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.978;0.962;1.000;1.000;1.000;1.000;
0.782;0.738;0.952;0.972)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000001138
Pan
sp. (Chimpanzee) : XR_020371
Pongo
sp. (Orangutan) : ENSPPYT00000019943
Macaca
sp. (Macaque) : XR_011372
Mus
sp. (Mouse) : AK154554
Mus
sp. (Mouse) : AK045744
Rattus
sp. (Rat) : XM_001067532
Canis
sp. (Dog) : ENSCAFT00000001010
Equus
sp. (Horse) : ENSECAT00000022211
Bos
sp. (Cow) : XM_865749
Monodelphis
sp. (Opossum) : XM_001381353
Gallus
sp. (Chicken) : ENSGALT00000022325
Danio
sp. (Zebrafish) : NM_001044840
Tetraodon
sp. (Tetraodon) : GSTENT00023077001
Takifugu
sp. (Fugu) : SINFRUT00000154641
ENSORLT00000018572
Representative transcript
genome : 8,721,312 - 8,730,569 (9,258)
query : 1 - 4,236 (4,236/4,236)
12 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000074309
Pan
sp. (Chimpanzee) : XM_001145331
Mus
sp. (Mouse) : AK147643
Mus
sp. (Mouse) : BC049966
Rattus
sp. (Rat) : ENSRNOT00000024412
Canis
sp. (Dog) : XM_541170
Equus
sp. (Horse) : XM_001914699
Bos
sp. (Cow) : ENSBTAT00000006700
Monodelphis
sp. (Opossum) : XM_001371183
Gallus
sp. (Chicken) : CR391709
Danio
sp. (Zebrafish) : XM_686015
Danio
sp. (Zebrafish) : NM_001045095
Tetraodon
sp. (Tetraodon) : GSTENT00023078001
Tetraodon
sp. (Tetraodon) : GSTENT00035735001
Takifugu
sp. (Fugu) : SINFRUT00000143662
Takifugu
sp. (Fugu) : SINFRUT00000168784
scaffold26_contig20442
8706786-8711170 W +
10
8711171-8711180 N
scaffold26_contig20443
8711181-8717390 W +
100
8717391-8717490 N
scaffold26_contig20444
8717491-8721195 W +
10
8721196-8721205 N
scaffold26_contig20445
8721206-8722785 W +
AT_rich
AT_rich
AT_rich
AT_rich
Tc1-1Ory
AT_rich