bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000003883
genome : 6,523,099 - 6,530,545 (7,447)
query : 1 - 906 (906/906)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000003885
Representative transcript
genome : 6,523,099 - 6,530,542 (7,444)
query : 1 - 1,014 (1,014/1,014)
8 exons
identity = 0.992
5'(1.000;1.000;1.000;1.000;1.000;0.918;0.900;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000069738
Pan
sp. (Chimpanzee) : XM_509642
Pongo
sp. (Orangutan) : ENSPPYT00000006282
Macaca
sp. (Macaque) : XM_001088596
Mus
sp. (Mouse) : AK154988
Rattus
sp. (Rat) : AY325139
Canis
sp. (Dog) : XM_543118
Equus
sp. (Horse) : XM_001916675
Bos
sp. (Cow) : BC112859
Monodelphis
sp. (Opossum) : ENSMODT00000013244
Gallus
sp. (Chicken) : AJ720668
Danio
sp. (Zebrafish) : NM_001128344
Tetraodon
sp. (Tetraodon) : GSTENT00022132001
Takifugu
sp. (Fugu) : SINFRUT00000134315
H.sapiens
(Human) : HIT000251060
Pan
sp. (Chimpanzee) : XM_527046
Pongo
sp. (Orangutan) : ENSPPYT00000018480
Macaca
sp. (Macaque) : XM_001092357
Mus
sp. (Mouse) : AK077159
Rattus
sp. (Rat) : XM_001065727
Canis
sp. (Dog) : XM_544307
Equus
sp. (Horse) : ENSECAT00000005452
Bos
sp. (Cow) : XM_586265
ENSORLT00000003923
genome : 6,533,959 - 6,537,220 (3,262)
query : 1 - 855 (855/855)
7 exons
identity = 0.993
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000003925
Representative transcript
genome : 6,534,694 - 6,537,223 (2,530)
query : 1 - 843 (843/858)
7 exons
identity = 0.998
5'(1.000)3'
coverage = 0.983
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000246492
Pan
sp. (Chimpanzee) : ENSPTRT00000003138
Pongo
sp. (Orangutan) : ENSPPYT00000000550
Macaca
sp. (Macaque) : ENSMMUT00000005336
Mus
sp. (Mouse) : BC067401
Rattus
sp. (Rat) : BC081687
Canis
sp. (Dog) : XM_547443
Equus
sp. (Horse) : ENSECAT00000009663
Bos
sp. (Cow) : ENSBTAT00000002806
Monodelphis
sp. (Opossum) : XM_001374160
Gallus
sp. (Chicken) : ENSGALT00000006621
Danio
sp. (Zebrafish) : BC133976
Tetraodon
sp. (Tetraodon) : GSTENT00035218001
Takifugu
sp. (Fugu) : SINFRUT00000181288
H.sapiens
(Human) : HIT000302709
Pan
sp. (Chimpanzee) : XM_001162264
Pongo
sp. (Orangutan) : ENSPPYT00000022825
Macaca
sp. (Macaque) : XM_001090536
Mus
sp. (Mouse) : U17297
Rattus
sp. (Rat) : BC083895
Canis
sp. (Dog) : AB467286
Equus
sp. (Horse) : XM_001501547
Bos
sp. (Cow) : XM_001253214
Monodelphis
sp. (Opossum) : XM_001369789
Gallus
sp. (Chicken) : BX934525
Danio
sp. (Zebrafish) : ENSDART00000080505
Oryzias
sp. (Medaka) : ENSORLT00000005957
Oryzias
sp. (Medaka) : ENSORLT00000015482
Tetraodon
sp. (Tetraodon) : GSTENT00009385001
Takifugu
sp. (Fugu) : SINFRUT00000145504
Takifugu
sp. (Fugu) : SINFRUT00000151045
scaffold11_contig9847
6518820-6522883 W -
204
6522884-6523087 N
scaffold11_contig9846
6523088-6534819 W -
AT_rich
AT_rich
AT_rich
AT_rich
AT_rich
AT_rich
piggyBAC-N1_OL
(TTTA)n
(ATTTG)n