bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000008527
Representative transcript
genome : 13,721,924 - 13,726,187 (4,264)
query : 1 - 1,344 (1,344/1,344)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000040404
Pan
sp. (Chimpanzee) : XM_512742
Pongo
sp. (Orangutan) : ENSPPYT00000011742
Macaca
sp. (Macaque) : XM_001104559
Mus
sp. (Mouse) : DQ020180
Canis
sp. (Dog) : XM_541569
Bos
sp. (Cow) : XM_600955
Monodelphis
sp. (Opossum) : XM_001375220
Danio
sp. (Zebrafish) : XM_001335557
Oryzias
sp. (Medaka) : ENSORLT00000013931
ENSORLT00000008550
Representative transcript
genome : 13,730,684 - 13,732,928 (2,245)
query : 1 - 1,147 (1,147/1,147)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000029689
Pan
sp. (Chimpanzee) : XR_021313
Pongo
sp. (Orangutan) : ENSPPYT00000008147
Macaca
sp. (Macaque) : XM_001084407
Mus
sp. (Mouse) : AK163190
Canis
sp. (Dog) : XM_860368
Equus
sp. (Horse) : ENSECAT00000024280
Bos
sp. (Cow) : BC105311
Monodelphis
sp. (Opossum) : XM_001365117
Gallus
sp. (Chicken) : ENSGALT00000021958
Danio
sp. (Zebrafish) : BC095131
Tetraodon
sp. (Tetraodon) : CR714904
Takifugu
sp. (Fugu) : SINFRUT00000130901
ENSORLT00000008552
genome : 13,730,939 - 13,732,881 (1,943)
query : 1 - 848 (848/861)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.985
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000008558
Representative transcript
genome : 13,734,067 - 13,734,537 (471)
query : 17 - 487 (471/487)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
scaffold25_contig19983
13723806-13726699 W +
10
13726700-13726709 N
scaffold25_contig19984
13726710-13739805 W +
piggyBAC-N1_OL
AT_rich
AT_rich
(TG)n
AT_rich
AT_rich
AT_rich