bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000001580
Representative transcript
genome : 2,989,898 - 2,999,040 (9,143)
query : 1 - 2,256 (2,256/2,256)
19 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000244564
Pan
sp. (Chimpanzee) : XR_023769
Pongo
sp. (Orangutan) : ENSPPYT00000003696
Macaca
sp. (Macaque) : ENSMMUT00000017255
Mus
sp. (Mouse) : NM_001009546
Rattus
sp. (Rat) : ENSRNOT00000054833
Canis
sp. (Dog) : XM_540872
Equus
sp. (Horse) : ENSECAT00000020227
Bos
sp. (Cow) : BC151635
Monodelphis
sp. (Opossum) : XM_001380087
Danio
sp. (Zebrafish) : BC097203
Tetraodon
sp. (Tetraodon) : GSTENT00029640001
Takifugu
sp. (Fugu) : SINFRUT00000142193
ENSORLT00000001635
Representative transcript
genome : 3,000,955 - 3,011,006 (10,052)
query : 2 - 2,817 (2,816/2,817)
20 exons
identity = 0.982
5'(0.926;0.974;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.989;1.000;1.000;1.000;
0.927;0.970;0.979;0.963;0.863;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000041124
Pan
sp. (Chimpanzee) : ENSPTRT00000031683
Pongo
sp. (Orangutan) : CR860479
Macaca
sp. (Macaque) : XM_001094669
Mus
sp. (Mouse) : BC046610
Rattus
sp. (Rat) : BC098664
Canis
sp. (Dog) : XM_546015
Equus
sp. (Horse) : ENSECAT00000006811
Bos
sp. (Cow) : BC151388
Monodelphis
sp. (Opossum) : ENSMODT00000037661
Gallus
sp. (Chicken) : XM_001232417
Danio
sp. (Zebrafish) : XM_687424
Danio
sp. (Zebrafish) : ENSDART00000098527
Tetraodon
sp. (Tetraodon) : GSTENT00029641001
Takifugu
sp. (Fugu) : SINFRUT00000157582
ENSORLT00000001639
genome : 3,001,959 - 3,003,994 (2,036)
query : 1 - 1,125 (1,125/1,125)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
scaffold875_contig108148
2997980-3008266 W -
567
3008267-3008833 N
scaffold875_contig108147
3008834-3009765 W -
10
3009766-3009775 N
scaffold875_contig108146
3009776-3010831 W -
10
3010832-3010841 N
scaffold875_contig108145
3010842-3013072 W -
60708
3013073-3013979 N
AT_rich
AT_rich
(TAAA)n