bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
O.latipes
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSORLT00000025397
genome : 8,950,081 - 9,069,501 (119,421)
query : 1 - 5,154 (5,154/5,272)
34 exons
identity = 0.961
5'(0.810;0.906)3'
coverage = 0.978
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000024095
genome : 8,988,085 - 9,068,007 (79,923)
query : 1 - 923 (923/923)
5 exons
identity = 0.987
5'()3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSORLT00000007991
genome : 9,045,317 - 9,057,567 (12,251)
query : 1 - 5,902 (5,902/5,902)
40 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.967;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.964)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB256929
Representative transcript
genome : 9,055,527 - 9,056,958 (1,432)
query : 1 - 518 (518/533)
5 exons
identity = 0.990
5'(0.977;0.990;1.000;0.992;0.990)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000069701
Pan
sp. (Chimpanzee) : XM_523785
Macaca
sp. (Macaque) : XM_001113779
Rattus
sp. (Rat) : BC113948
Canis
sp. (Dog) : ENSCAFT00000027883
Bos
sp. (Cow) : AB059398
Monodelphis
sp. (Opossum) : XM_001371567
Gallus
sp. (Chicken) : AY116217
Danio
sp. (Zebrafish) : XM_001923974
Takifugu
sp. (Fugu) : SINFRUT00000180785
H.sapiens
(Human) : HIT000195693
Pan
sp. (Chimpanzee) : XM_001165174
Pongo
sp. (Orangutan) : ENSPPYT00000009339
Macaca
sp. (Macaque) : XM_001113700
Mus
sp. (Mouse) : AK029328
Equus
sp. (Horse) : XM_001504851
Bos
sp. (Cow) : AB090156
Oryzias
sp. (Medaka) : ENSORLT00000007759
Tetraodon
sp. (Tetraodon) : GSTENT00012973001
H.sapiens
(Human) : HIT000321407
Pan
sp. (Chimpanzee) : XR_024335
Macaca
sp. (Macaque) : XM_001114028
Mus
sp. (Mouse) : M74753
Canis
sp. (Dog) : ENSCAFT00000027824
Equus
sp. (Horse) : XM_001504855
Bos
sp. (Cow) : BC149227
Danio
sp. (Zebrafish) : XM_001923178
Tetraodon
sp. (Tetraodon) : GSTENT00006228001
H.sapiens
(Human) : HIT000340302
Pan
sp. (Chimpanzee) : XM_001150786
Pongo
sp. (Orangutan) : ENSPPYT00000006701
Macaca
sp. (Macaque) : XM_001102827
Mus
sp. (Mouse) : AY056464
Rattus
sp. (Rat) : X15939
Equus
sp. (Horse) : AB088367
Bos
sp. (Cow) : AB059400
Monodelphis
sp. (Opossum) : ENSMODT00000005563
Gallus
sp. (Chicken) : AB021180
Danio
sp. (Zebrafish) : EF030714
Tetraodon
sp. (Tetraodon) : GSTENT00006200001
scaffold31_contig22799
9048242-9058161 W +
10
9058162-9058171 N
scaffold31_contig22800
9058172-9064241 W +
AT_rich
AT_rich
piggyBAC-N1_OL
(ATAAG)n