bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.musculus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
AK044384
genome : 26,250,261 - 26,259,331 (9,071)
query : 2 - 2,597 (2,596/2,597)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
AB045293
Representative transcript
genome : 26,250,262 - 26,260,197 (9,936)
query : 1 - 3,462 (3,462/3,480)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000016690
Pan
sp. (Chimpanzee) : XM_510709
Pongo
sp. (Orangutan) : ENSPPYT00000008148
Macaca
sp. (Macaque) : XM_001118461
Rattus
sp. (Rat) : XM_001061336
Canis
sp. (Dog) : XM_537022
Equus
sp. (Horse) : XM_001915417
Bos
sp. (Cow) : BC146051
Monodelphis
sp. (Opossum) : XM_001372542
Gallus
sp. (Chicken) : ENSGALT00000012079
Danio
sp. (Zebrafish) : XM_001920332
Oryzias
sp. (Medaka) : ENSORLT00000012225
Tetraodon
sp. (Tetraodon) : GSTENT00015043001
Takifugu
sp. (Fugu) : SINFRUT00000140924
NM_021793
genome : 26,250,262 - 26,260,197 (9,936)
query : 1 - 3,462 (3,462/3,480)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
RefSeq
ENSMUST00000025010
genome : 26,250,262 - 26,260,196 (9,935)
query : 1 - 3,460 (3,460/3,460)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
BC005722
genome : 26,253,576 - 26,259,292 (5,717)
query : 1 - 2,433 (2,433/2,449)
12 exons
identity = 0.999
5'(0.997;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
AK198386
genome : 26,254,766 - 26,255,117 (352)
query : 1 - 253 (253/253)
2 exons
identity = 0.980
5'(0.974;1.000)3'
coverage = 1.000
DDBJ
AK079893
genome : 26,254,774 - 26,260,194 (5,421)
query : 1 - 3,357 (3,357/3,359)
6 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;0.999)3'
coverage = 0.999
DDBJ
AK215225
genome : 26,259,022 - 26,259,405 (384)
query : 1 - 384 (384/384)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
DDBJ
AK163190
Representative transcript
genome : 26,260,465 - 26,263,556 (3,092)
query : 1 - 1,046 (1,046/1,047)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 0.999
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000029689
Pan
sp. (Chimpanzee) : XR_021313
Pongo
sp. (Orangutan) : ENSPPYT00000008147
Macaca
sp. (Macaque) : XM_001084407
Canis
sp. (Dog) : XM_860368
Equus
sp. (Horse) : ENSECAT00000024280
Bos
sp. (Cow) : BC105311
Monodelphis
sp. (Opossum) : XM_001365117
Gallus
sp. (Chicken) : ENSGALT00000021958
Danio
sp. (Zebrafish) : BC095131
Oryzias
sp. (Medaka) : ENSORLT00000008550
Tetraodon
sp. (Tetraodon) : CR714904
Takifugu
sp. (Fugu) : SINFRUT00000130901
AK046544
genome : 26,260,467 - 26,263,556 (3,090)
query : 1 - 1,044 (1,044/1,044)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
DDBJ
AK003727
genome : 26,260,467 - 26,263,555 (3,089)
query : 1 - 1,038 (1,038/1,038)
5 exons
identity = 0.987
5'(0.997;0.963;0.992;1.000;0.982)3'
coverage = 1.000
DDBJ
BC100322
genome : 26,260,476 - 26,263,557 (3,082)
query : 1 - 1,036 (1,036/1,113)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
DDBJ
BC005797
genome : 26,260,476 - 26,263,557 (3,082)
query : 1 - 1,036 (1,036/1,052)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
DDBJ
BC002293
genome : 26,260,477 - 26,263,557 (3,081)
query : 1 - 1,035 (1,035/1,066)
5 exons
identity = 0.986
5'(0.991;0.963;0.992;0.989;0.988)3'
coverage = 1.000
DDBJ
NM_024227
genome : 26,260,477 - 26,263,557 (3,081)
query : 1 - 1,035 (1,035/1,066)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
RefSeq
AK031701
genome : 26,260,480 - 26,263,556 (3,077)
query : 4 - 1,033 (1,030/1,033)
5 exons
identity = 0.991
5'(0.997;0.963;0.992;1.000;0.997)3'
coverage = 0.997
DDBJ
BC145680
genome : 26,260,479 - 26,263,541 (3,063)
query : 1 - 1,017 (1,017/1,017)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
DDBJ
BC145682
genome : 26,260,479 - 26,263,541 (3,063)
query : 1 - 1,017 (1,017/1,017)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
DDBJ
ENSMUST00000025014
genome : 26,260,480 - 26,263,556 (3,077)
query : 1 - 1,031 (1,031/1,031)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
Ensembl
BC080753
genome : 26,260,502 - 26,263,557 (3,056)
query : 1 - 1,010 (1,010/1,024)
5 exons
identity = 0.993
5'(1.000;0.963;0.992;1.000;1.000)3'
coverage = 1.000
DDBJ
AC140047.8
26247229-26263228 F +
NCBI
B3A
B3A
B1_Mus2
B1_Mus1
PB1D7
B1_Mus1
G-rich
(CTG)n
GC_rich
B2_Mm1a
(TTTA)n
B2_Mm1a
B2_Mm1a
GC_rich
L2a
B1_Mus2
MT2B
(TTTC)n
B1_Mus1