bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.musculus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC038264
genome : 79,855,285 - 79,862,111 (6,827)
query : 11 - 1,391 (1,381/1,405)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 0.993
DDBJ
ENSMUST00000105349
genome : 79,855,284 - 79,862,295 (7,012)
query : 1 - 1,566 (1,566/1,566)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
AF072248
Representative transcript
genome : 79,855,286 - 79,862,224 (6,939)
query : 1 - 1,589 (1,589/1,589)
7 exons
identity = 0.999
3'(1.000)5'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000065883
Pan
sp. (Chimpanzee) : XM_524036
Pongo
sp. (Orangutan) : CR858079
Macaca
sp. (Macaque) : ENSMMUT00000012595
Rattus
sp. (Rat) : XM_001076468
Canis
sp. (Dog) : XM_863499
Equus
sp. (Horse) : ENSECAT00000016296
Bos
sp. (Cow) : XM_868057
Monodelphis
sp. (Opossum) : XM_001363658
Gallus
sp. (Chicken) : AJ719606
Danio
sp. (Zebrafish) : BC093115
Oryzias
sp. (Medaka) : ENSORLT00000006113
Tetraodon
sp. (Tetraodon) : GSTENT00020101001
Takifugu
sp. (Fugu) : SINFRUT00000133011
Takifugu
sp. (Fugu) : SINFRUT00000133260
ENSMUST00000092295
genome : 79,855,286 - 79,862,224 (6,939)
query : 1 - 1,589 (1,589/1,589)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
NM_013595
genome : 79,855,286 - 79,862,224 (6,939)
query : 1 - 1,589 (1,589/1,589)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
ENSMUST00000105348
genome : 79,855,584 - 79,862,167 (6,584)
query : 1 - 1,222 (1,222/1,222)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
AK014377
Representative transcript
genome : 79,863,390 - 79,864,420 (1,031)
query : 1 - 1,031 (1,031/1,032)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
DDBJ
BC034408
genome : 79,865,742 - 79,869,530 (3,789)
query : 1 - 400 (400/426)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
NM_025650
genome : 79,865,742 - 79,869,566 (3,825)
query : 1 - 436 (436/436)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
ENSMUST00000020372
genome : 79,865,743 - 79,869,530 (3,788)
query : 1 - 399 (399/399)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
AK146292
genome : 79,865,743 - 79,869,511 (3,769)
query : 2 - 577 (576/577)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.998
DDBJ
AK003033
Representative transcript
genome : 79,865,744 - 79,869,575 (3,832)
query : 2 - 444 (443/444)
3 exons
identity = 0.991
3'(0.987;0.993;0.993)5'
coverage = 0.998
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000031626
Pan
sp. (Chimpanzee) : ENSPTRT00000018741
Pongo
sp. (Orangutan) : CR859798
Macaca
sp. (Macaque) : XM_001096084
Rattus
sp. (Rat) : XM_001076456
Canis
sp. (Dog) : XM_849498
Equus
sp. (Horse) : ENSECAT00000024016
Bos
sp. (Cow) : BC102080
Monodelphis
sp. (Opossum) : XM_001363743
Gallus
sp. (Chicken) : BX935808
Tetraodon
sp. (Tetraodon) : CR707029
AK167946
genome : 79,865,744 - 79,869,560 (3,817)
query : 3 - 430 (428/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.995
DDBJ
AK003443
genome : 79,865,744 - 79,869,545 (3,802)
query : 2 - 414 (413/414)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.998
DDBJ
AK168974
genome : 79,865,744 - 79,869,530 (3,787)
query : 2 - 399 (398/399)
3 exons
identity = 0.997
3'(1.000;1.000;0.989)5'
coverage = 0.997
DDBJ
AK013513
genome : 79,865,747 - 79,869,511 (3,765)
query : 4 - 379 (376/380)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.989
DDBJ
AK158001
Representative transcript
genome : 79,869,623 - 79,872,399 (2,777)
query : 4 - 2,780 (2,777/2,780)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
DDBJ
AK147735
genome : 79,872,071 - 79,896,421 (24,351)
query : 1 - 2,808 (2,808/2,808)
17 exons
identity = 0.994
3'(0.999;1.000)5'
coverage = 1.000
DDBJ
AK161009
Representative transcript
genome : 79,872,259 - 79,896,382 (24,124)
query : 2 - 2,949 (2,948/2,949)
19 exons
identity = 0.999
3'(0.997;1.000)5'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000195418
Pan
sp. (Chimpanzee) : XR_025229
Pongo
sp. (Orangutan) : ENSPPYT00000010880
Macaca
sp. (Macaque) : ENSMMUT00000012598
Rattus
sp. (Rat) : BC078750
Canis
sp. (Dog) : ENSCAFT00000030997
Equus
sp. (Horse) : ENSECAT00000002202
Bos
sp. (Cow) : XM_609091
Monodelphis
sp. (Opossum) : ENSMODT00000005211
Gallus
sp. (Chicken) : AJ579996
Danio
sp. (Zebrafish) : BC160651
Danio
sp. (Zebrafish) : ENSDART00000099850
Oryzias
sp. (Medaka) : ENSORLT00000006201
Tetraodon
sp. (Tetraodon) : GSTENT00007529001
Tetraodon
sp. (Tetraodon) : GSTENT00028519001
Takifugu
sp. (Fugu) : SINFRUT00000133008
Takifugu
sp. (Fugu) : SINFRUT00000133258
ENSMUST00000105344
genome : 79,872,259 - 79,896,382 (24,124)
query : 1 - 2,946 (2,946/2,946)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
BC006860
genome : 79,872,339 - 79,896,352 (24,014)
query : 1 - 2,830 (2,830/2,898)
19 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
DDBJ
NM_011548
genome : 79,872,339 - 79,896,352 (24,014)
query : 1 - 2,830 (2,830/2,898)
19 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
RefSeq
AK170674
genome : 79,872,292 - 79,896,392 (24,101)
query : 1 - 2,920 (2,920/2,920)
19 exons
identity = 0.999
3'(1.000;0.996)5'
coverage = 1.000
DDBJ
ENSMUST00000105343
genome : 79,872,292 - 79,896,392 (24,101)
query : 1 - 2,920 (2,920/2,920)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
AK146786
genome : 79,872,292 - 79,896,388 (24,097)
query : 1 - 2,932 (2,932/2,932)
19 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
DDBJ
ENSMUST00000105342
genome : 79,872,292 - 79,896,388 (24,097)
query : 1 - 2,928 (2,928/2,928)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
BC018260
genome : 79,872,368 - 79,893,772 (21,405)
query : 1 - 2,484 (2,484/2,518)
18 exons
identity = 1.000
3'(0.998;1.000)5'
coverage = 1.000
DDBJ
AK156265
genome : 79,872,342 - 79,896,379 (24,038)
query : 3 - 2,866 (2,864/2,867)
19 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 0.999
DDBJ
ENSMUST00000105345
genome : 79,872,342 - 79,896,379 (24,038)
query : 1 - 2,854 (2,854/2,854)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
ENSMUST00000105346
genome : 79,872,342 - 79,896,379 (24,038)
query : 1 - 2,863 (2,863/2,863)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
AK014300
genome : 79,872,342 - 79,875,996 (3,655)
query : 1 - 963 (963/963)
3 exons
identity = 0.992
3'(0.988;1.000)5'
coverage = 1.000
DDBJ
AK017617
genome : 79,872,353 - 79,896,366 (24,014)
query : 1 - 2,838 (2,838/2,838)
19 exons
identity = 0.998
3'(0.999;1.000)5'
coverage = 1.000
DDBJ
ENSMUST00000020377
genome : 79,872,353 - 79,896,366 (24,014)
query : 1 - 2,842 (2,842/2,842)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
AK038738
genome : 79,872,364 - 79,896,385 (24,022)
query : 1 - 2,841 (2,841/2,843)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
DDBJ
ENSMUST00000105341
genome : 79,872,365 - 79,893,757 (21,393)
query : 1 - 2,451 (2,451/2,451)
18 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
AK034777
genome : 79,872,371 - 79,896,380 (24,010)
query : 2 - 2,827 (2,826/2,827)
19 exons
identity = 0.999
3'(0.998;0.996)5'
coverage = 1.000
DDBJ
ENSMUST00000020379
genome : 79,872,371 - 79,896,380 (24,010)
query : 1 - 2,829 (2,829/2,829)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
ENSMUST00000105340
genome : 79,872,371 - 79,896,380 (24,010)
query : 1 - 2,826 (2,826/2,826)
19 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
X17500
genome : 79,872,748 - 79,878,654 (5,907)
query : 1 - 975 (975/976)
6 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
DDBJ
ENSMUST00000105339
genome : 79,872,799 - 79,893,827 (21,029)
query : 1 - 2,096 (2,096/2,096)
18 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
AF352579
genome : 79,872,874 - 79,896,094 (23,221)
query : 1 - 2,036 (2,036/2,036)
19 exons
identity = 0.998
3'(1.000;1.000)5'
coverage = 1.000
DDBJ
D16631
genome : 79,872,874 - 79,878,266 (5,393)
query : 7 - 796 (790/796)
5 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.992
DDBJ
D29919
genome : 79,872,874 - 79,876,075 (3,202)
query : 1 - 508 (508/508)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
DDBJ
AK192255
genome : 79,872,983 - 79,873,181 (199)
query : 1 - 76 (76/76)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
DDBJ
AK205365
genome : 79,873,244 - 79,876,038 (2,795)
query : 1 - 215 (215/215)
2 exons
identity = 0.995
3'(0.992)5'
coverage = 1.000
DDBJ
AC152062.6
79859659-79875658 F -
NCBI
ID_B1
ID_B1
PB1D10
(A)n
B2_Mm2
(CCG)n
B1F
B4A
PB1D10
PB1D9
ID_B1
ORR1A4
B3
PB1D10
B1_Mus1
ID_B1
B3A
B4A
B1F
PB1D9
B1F
ID_B1
PB1D10
ID_B1
B3
PB1D10
PB1D10
ID_B1
B4
B3
B1_Mur1
MT2A
(CA)n
(CTGGGG)n
GC_rich