bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.musculus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
AK050227
Representative transcript
genome : 125,029,174 - 125,047,689 (18,516)
query : 2 - 2,649 (2,648/2,649)
13 exons
identity = 1.000
5'(0.986;1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000261813
Pan
sp. (Chimpanzee) : XM_509469
Pongo
sp. (Orangutan) : ENSPPYT00000006022
Rattus
sp. (Rat) : BC093380
Canis
sp. (Dog) : XM_534644
Equus
sp. (Horse) : XM_001498352
Bos
sp. (Cow) : BC122792
Monodelphis
sp. (Opossum) : XM_001375371
Gallus
sp. (Chicken) : BX935599
Danio
sp. (Zebrafish) : BC076236
Danio
sp. (Zebrafish) : ENSDART00000097244
Oryzias
sp. (Medaka) : ENSORLT00000007404
Tetraodon
sp. (Tetraodon) : CR691423
Takifugu
sp. (Fugu) : SINFRUT00000127843
BC017515
genome : 125,029,180 - 125,046,850 (17,671)
query : 1 - 1,797 (1,797/1,815)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;0.992)3'
coverage = 1.000
DDBJ
NM_181410
genome : 125,029,180 - 125,046,850 (17,671)
query : 1 - 1,797 (1,797/1,815)
13 exons
identity = 0.996
5'(1.000;1.000;1.000;0.992)3'
coverage = 1.000
RefSeq
ENSMUST00000031333
genome : 125,029,180 - 125,046,849 (17,670)
query : 1 - 1,801 (1,801/1,801)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
AK133941
genome : 125,029,187 - 125,046,849 (17,663)
query : 2 - 1,794 (1,793/1,795)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
DDBJ
AK017176
genome : 125,040,388 - 125,046,596 (6,209)
query : 5 - 1,527 (1,523/1,527)
6 exons
identity = 0.992
5'(0.986;0.963;1.000;0.996)3'
coverage = 0.997
DDBJ
AK192825
genome : 125,040,928 - 125,045,622 (4,695)
query : 1 - 217 (217/217)
4 exons
identity = 0.959
5'(0.971;0.897)3'
coverage = 1.000
DDBJ
AK031829
genome : 125,048,758 - 125,077,658 (28,901)
query : 2 - 2,645 (2,644/2,737)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;0.990;0.980;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 0.966
DDBJ
NM_026486
genome : 125,048,758 - 125,077,658 (28,901)
query : 1 - 2,644 (2,644/2,735)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;0.990;0.980;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.967
RefSeq
ENSMUST00000100706
genome : 125,048,758 - 125,077,658 (28,901)
query : 1 - 2,644 (2,644/2,644)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;0.990;0.980;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
DQ278869
genome : 125,048,760 - 125,077,658 (28,899)
query : 1 - 2,642 (2,642/2,734)
18 exons
identity = 0.996
5'(0.995;0.972;0.987;0.990;0.980;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000)3'
coverage = 0.966
DDBJ
XR_034387
genome : 125,048,760 - 125,077,466 (28,707)
query : 1 - 2,447 (2,447/2,447)
18 exons
identity = 0.998
5'(1.000;0.972;0.987;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
AK012720
genome : 125,048,786 - 125,077,463 (28,678)
query : 2 - 2,425 (2,424/2,426)
18 exons
identity = 0.996
5'(1.000;1.000;1.000;0.990;0.980;0.995;1.000;
1.000;1.000;1.000;0.987;1.000;1.000;0.991;
1.000;0.992;1.000;0.997)3'
coverage = 0.999
DDBJ
AK014476
genome : 125,048,793 - 125,077,658 (28,866)
query : 2 - 2,610 (2,609/2,701)
18 exons
identity = 0.998
5'(1.000;1.000;1.000;0.990;0.980;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.966
DDBJ
AK165102
genome : 125,048,793 - 125,055,669 (6,877)
query : 2 - 2,470 (2,469/2,470)
5 exons
identity = 0.996
5'(1.000;0.991;1.000;0.990;0.996)3'
coverage = 1.000
DDBJ
AK083080
genome : 125,048,796 - 125,053,339 (4,544)
query : 1 - 2,311 (2,311/2,311)
2 exons
identity = 0.998
5'(0.997;0.998)3'
coverage = 1.000
DDBJ
AK032378
genome : 125,048,801 - 125,077,415 (28,615)
query : 2 - 2,486 (2,485/2,486)
17 exons
identity = 0.995
5'(0.998;1.000;0.990;0.978;0.957;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
AK087856
genome : 125,048,801 - 125,068,566 (19,766)
query : 2 - 3,404 (3,403/3,404)
11 exons
identity = 0.996
5'(1.000;1.000;1.000;0.990;0.960;1.000;0.992;
1.000;1.000;1.000;0.997)3'
coverage = 1.000
DDBJ
BC058375
genome : 125,048,806 - 125,077,467 (28,662)
query : 1 - 2,316 (2,316/2,339)
17 exons
identity = 0.991
5'(1.000;0.838;0.990;0.980;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
DDBJ
AK162182
Representative transcript
genome : 125,049,178 - 125,079,352 (30,175)
query : 1 - 2,643 (2,643/2,643)
18 exons
identity = 0.997
5'(1.000;1.000;0.990;0.980;0.995;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;0.997;0.998)3'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000342576
Pongo
sp. (Orangutan) : ENSPPYT00000006023
Canis
sp. (Dog) : ENSCAFT00000011677
Bos
sp. (Cow) : ENSBTAT00000009562
Gallus
sp. (Chicken) : CR391469
Danio
sp. (Zebrafish) : XM_687198
AK205474
genome : 125,057,817 - 125,060,422 (2,606)
query : 1 - 393 (393/396)
3 exons
identity = 0.995
5'(1.000;0.992;0.993)3'
coverage = 0.992
DDBJ
AK008223
genome : 125,069,084 - 125,077,429 (8,346)
query : 1 - 938 (938/938)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.992;0.989;0.997)3'
coverage = 1.000
DDBJ
AK208456
genome : 125,075,940 - 125,077,219 (1,280)
query : 1 - 159 (159/159)
2 exons
identity = 0.981
5'(0.982;0.981)3'
coverage = 1.000
DDBJ
AK211913
genome : 125,077,275 - 125,077,469 (195)
query : 1 - 195 (195/203)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.961
DDBJ
AK170122
genome : 125,079,646 - 125,202,510 (122,865)
query : 1 - 3,526 (3,526/3,526)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
AF218252
genome : 125,079,648 - 125,202,516 (122,869)
query : 1 - 3,020 (3,020/3,037)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
NM_011596
genome : 125,079,648 - 125,202,516 (122,869)
query : 1 - 3,020 (3,020/3,037)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
AK155055
genome : 125,079,657 - 125,203,018 (123,362)
query : 2 - 3,514 (3,513/3,515)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
DDBJ
AB022323
genome : 125,079,667 - 125,202,418 (122,752)
query : 1 - 2,903 (2,903/2,903)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
ENSMUST00000037865
genome : 125,079,667 - 125,202,418 (122,752)
query : 1 - 2,903 (2,903/2,903)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
BC112905
Representative transcript
genome : 125,079,673 - 125,204,825 (125,153)
query : 1 - 5,304 (5,304/5,331)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000263088
Pan
sp. (Chimpanzee) : XR_024214
Pongo
sp. (Orangutan) : ENSPPYT00000006024
Macaca
sp. (Macaque) : AB179056
Rattus
sp. (Rat) : AY325239
Canis
sp. (Dog) : XM_543370
Equus
sp. (Horse) : XM_001915444
Bos
sp. (Cow) : AF105016
Monodelphis
sp. (Opossum) : ENSMODT00000015999
Gallus
sp. (Chicken) : AJ289020
Danio
sp. (Zebrafish) : XM_001923948
Danio
sp. (Zebrafish) : XM_703033
Oryzias
sp. (Medaka) : ENSORLT00000008503
Oryzias
sp. (Medaka) : ENSORLT00000011511
Tetraodon
sp. (Tetraodon) : GSTENT00017316001
Tetraodon
sp. (Tetraodon) : GSTENT00029489001
Takifugu
sp. (Fugu) : SINFRUT00000155131
BC018369
genome : 125,079,680 - 125,202,516 (122,837)
query : 1 - 2,988 (2,988/3,002)
20 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
M31226
genome : 125,079,737 - 125,202,523 (122,787)
query : 1 - 2,936 (2,936/2,936)
20 exons
identity = 0.998
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
X55184
genome : 125,079,737 - 125,202,523 (122,787)
query : 1 - 2,937 (2,937/2,937)
20 exons
identity = 0.998
5'(0.993;1.000)3'
coverage = 1.000
DDBJ
BC108991
genome : 125,079,737 - 125,202,224 (122,488)
query : 1 - 2,640 (2,640/2,642)
20 exons
identity = 0.998
5'(0.993;0.987)3'
coverage = 0.999
DDBJ
BC108992
genome : 125,079,737 - 125,202,224 (122,488)
query : 1 - 2,640 (2,640/2,642)
20 exons
identity = 1.000
5'(0.993;1.000)3'
coverage = 0.999
DDBJ
AK193082
genome : 125,079,770 - 125,086,661 (6,892)
query : 1 - 246 (246/246)
3 exons
identity = 0.980
5'(0.990;0.962)3'
coverage = 1.000
DDBJ
AC127313.3
125044265-125069476 F +
NCBI
CAAA01086732.1
125069477-125077659 W +
1026
125077660-125078685 N
CAAA01086728.1
125078686-125082200 W +
100
125082201-125082300 N
CAAA01086724.1
125082301-125084264 W +