bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.musculus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
AK042632
genome : 88,199,407 - 88,201,282 (1,876)
query : 4 - 1,879 (1,876/1,879)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
DDBJ
AK080081
genome : 88,199,809 - 88,202,424 (2,616)
query : 2 - 1,127 (1,126/1,127)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.999
DDBJ
AF502429
genome : 88,199,819 - 88,202,810 (2,992)
query : 1 - 1,502 (1,502/1,502)
2 exons
identity = 0.996
5'(0.994;0.997)3'
coverage = 1.000
DDBJ
AK131975
genome : 88,200,005 - 88,203,868 (3,864)
query : 1 - 2,374 (2,374/2,374)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
BC031187
genome : 88,200,043 - 88,203,879 (3,837)
query : 1 - 2,347 (2,347/2,367)
2 exons
identity = 0.997
5'(1.000;0.997)3'
coverage = 1.000
DDBJ
NM_145222
genome : 88,200,043 - 88,203,879 (3,837)
query : 1 - 2,347 (2,347/2,367)
2 exons
identity = 0.997
5'(1.000;0.997)3'
coverage = 1.000
RefSeq
ENSMUST00000113306
genome : 88,200,043 - 88,203,878 (3,836)
query : 1 - 2,346 (2,346/2,346)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
AK154691
genome : 88,200,047 - 88,202,424 (2,378)
query : 4 - 891 (888/891)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.997
DDBJ
AK133674
genome : 88,200,058 - 88,203,874 (3,817)
query : 2 - 2,328 (2,327/2,328)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
DDBJ
BC060507
Representative transcript
genome : 88,200,077 - 88,203,879 (3,803)
query : 1 - 2,215 (2,215/2,233)
3 exons
identity = 0.997
5'(1.000;0.997;0.998)3'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000046080
Pan
sp. (Chimpanzee) : XR_023173
Macaca
sp. (Macaque) : XM_001106531
Rattus
sp. (Rat) : BC081994
Bos
sp. (Cow) : XM_582813
Monodelphis
sp. (Opossum) : XM_001373054
Gallus
sp. (Chicken) : BX932869
Danio
sp. (Zebrafish) : AF321827
Oryzias
sp. (Medaka) : ENSORLT00000008871
Tetraodon
sp. (Tetraodon) : GSTENT00022905001
Takifugu
sp. (Fugu) : SINFRUT00000161328
AK049105
genome : 88,200,106 - 88,202,424 (2,319)
query : 2 - 1,524 (1,523/1,524)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
DDBJ
BC029550
genome : 88,202,460 - 88,203,869 (1,410)
query : 1 - 1,410 (1,410/1,429)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
DDBJ
BC026409
genome : 88,202,519 - 88,203,869 (1,351)
query : 1 - 1,351 (1,351/1,377)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
DDBJ
AC104896.13
88193978-88209531 F -
NCBI
AC102609.7
88209532-88209977 F -
NCBI
C-rich
(CATA)n
(TTTG)n
B1_Mus1
B2_Mm2
PB1D10
B1_Mur1
Looper
L4
MER45A
(A)n
ID_B1
B2_Mm2
RSINE1
T-rich
B1_Mus2
T-rich
B1_Mur1
B2_Mm2
B1_Mm
B1_Mus1