bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.musculus
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
BC093588
genome : 171,671,614 - 171,671,809 (196)
query : 8 - 203 (196/299)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 0.966
DDBJ
NM_009062
genome : 171,671,609 - 171,677,773 (6,165)
query : 1 - 2,940 (2,940/2,952)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
DQ346661
Representative transcript
genome : 171,671,618 - 171,677,773 (6,156)
query : 1 - 2,931 (2,931/2,931)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
Ortholog candidate
H.sapiens
(Human) : HIT000436177
Pan
sp. (Chimpanzee) : XM_513957
Pongo
sp. (Orangutan) : CR858680
Macaca
sp. (Macaque) : AB169719
Rattus
sp. (Rat) : AF117211
Canis
sp. (Dog) : XM_545783
Equus
sp. (Horse) : ENSECAT00000019554
Monodelphis
sp. (Opossum) : XM_001363415
Gallus
sp. (Chicken) : AY297457
Danio
sp. (Zebrafish) : BC092675
Oryzias
sp. (Medaka) : ENSORLT00000015355
Oryzias
sp. (Medaka) : ENSORLT00000015504
BC003882
genome : 171,671,806 - 171,677,751 (5,946)
query : 1 - 2,767 (2,767/2,781)
5 exons
identity = 0.980
3'(0.976;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
DQ346660
genome : 171,671,805 - 171,677,773 (5,969)
query : 1 - 2,744 (2,744/2,744)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
ENSMUST00000111357
genome : 171,671,807 - 171,677,773 (5,967)
query : 1 - 2,575 (2,575/2,575)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
DQ346659
genome : 171,672,239 - 171,677,773 (5,535)
query : 1 - 2,310 (2,310/2,310)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
BC055293
genome : 171,672,440 - 171,677,763 (5,324)
query : 1 - 2,099 (2,099/2,114)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
AK030536
genome : 171,672,435 - 171,677,773 (5,339)
query : 2 - 2,115 (2,114/2,115)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
AK039134
genome : 171,672,441 - 171,677,773 (5,333)
query : 2 - 2,109 (2,108/2,109)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
ENSMUST00000027991
genome : 171,672,441 - 171,677,773 (5,333)
query : 1 - 2,108 (2,108/2,108)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
ENSMUST00000104793
genome : 171,673,259 - 171,673,327 (69)
query : 1 - 69 (69/69)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
AB004315
genome : 171,673,800 - 171,677,654 (3,855)
query : 1 - 630 (630/630)
5 exons
identity = 0.997
3'(0.996;0.994;1.000;1.000;1.000)5'
coverage = 1.000
DDBJ
AC115766.9
171666695-171682694 F -
NCBI
CT-rich
MIRb
(CAAA)n
B1_Mus1
(GAAA)n
RMER17A
B1F
T-rich
polypyrimidine
(TA)n
(TG)n
(TG)n
PB1D10
(TG)n
MIRb
(GA)n
(CAAAAA)n
(TC)n
L2c