bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001095007
genome : 3,623,807 - 3,663,886 (40,080)
query : 1 - 2,815 (2,815/2,815)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000010587
genome : 3,623,824 - 3,662,803 (38,980)
query : 1 - 1,658 (1,658/1,658)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB169043
Representative transcript
genome : 3,623,851 - 3,663,045 (39,195)
query : 1 - 1,872 (1,872/1,949)
12 exons
identity = 0.995
5'(0.980;0.991;1.000;1.000;0.979;1.000;0.993;
1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000242089
Pan
sp. (Chimpanzee) : XM_001167259
Pongo
sp. (Orangutan) : ENSPPYT00000002754
Mus
sp. (Mouse) : BC024910
Rattus
sp. (Rat) : BC079022
Canis
sp. (Dog) : ENSCAFT00000030600
Equus
sp. (Horse) : ENSECAT00000018201
Bos
sp. (Cow) : BC134775
Monodelphis
sp. (Opossum) : ENSMODT00000020874
Gallus
sp. (Chicken) : CR386534
Danio
sp. (Zebrafish) : BC045921
Oryzias
sp. (Medaka) : ENSORLT00000008354
Tetraodon
sp. (Tetraodon) : GSTENT00025299001
Takifugu
sp. (Fugu) : SINFRUT00000132534
ENSMMUT00000039625
genome : 3,623,873 - 3,662,768 (38,896)
query : 1 - 1,631 (1,631/1,631)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000010590
genome : 3,623,873 - 3,659,022 (35,150)
query : 1 - 1,217 (1,217/1,217)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.984)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000216507
(
S73885
)
genome : 3,331,723 - 4,411,021 (1,079,299)
query : 3 - 2,142 (2,140/2,149)
7 exons
identity = 0.941
3'()5'
coverage = 0.996
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000242089
(
AB089691
)
genome : 3,623,824 - 3,662,806 (38,983)
query : 1 - 1,660 (1,660/1,681)
12 exons
identity = 0.969
5'(0.937;1.000;0.976;0.983;0.979;0.988;0.993;
0.958;0.986;0.944;0.982;0.957)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000006633
(
AK023359
)
genome : 3,633,026 - 3,663,886 (30,861)
query : 1 - 2,220 (2,220/2,221)
8 exons
identity = 0.950
5'(0.908;0.988;0.993;0.958;0.986;0.944;0.982;
0.943)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000006593
(
AK023319
)
genome : 3,644,367 - 3,664,801 (20,435)
query : 1 - 2,309 (2,309/2,309)
7 exons
identity = 0.936
5'(1.000;0.958;0.986;0.944;0.982;0.941)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000340631
(
BC113975
)
genome : 3,659,539 - 3,660,500 (962)
query : 2 - 828 (827/830)
2 exons
identity = 0.875
3'(0.891;0.866)5'
coverage = 0.996
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
3623448-3663447 F +