bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001101197
Representative transcript
genome : 71,681,303 - 71,749,438 (68,136)
query : 1 - 3,357 (3,357/3,357)
10 exons
identity = 0.992
3'(0.992;1.000;1.000;1.000;1.000;1.000;0.920;
1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000038406
Pan
sp. (Chimpanzee) : ENSPTRT00000026534
Pongo
sp. (Orangutan) : CR860540
Mus
sp. (Mouse) : AK028235
Rattus
sp. (Rat) : D21132
Canis
sp. (Dog) : XM_859666
Equus
sp. (Horse) : XM_001499699
Bos
sp. (Cow) : BC126510
Monodelphis
sp. (Opossum) : XM_001379939
Gallus
sp. (Chicken) : AJ720652
Danio
sp. (Zebrafish) : ENSDART00000052268
Oryzias
sp. (Medaka) : ENSORLT00000000612
Tetraodon
sp. (Tetraodon) : CR693090
Tetraodon
sp. (Tetraodon) : GSTENT00025294001
Takifugu
sp. (Fugu) : SINFRUT00000146764
Takifugu
sp. (Fugu) : SINFRUT00000170887
Takifugu
sp. (Fugu) : SINFRUT00000175946
ENSMMUT00000020388
genome : 71,683,746 - 71,744,498 (60,753)
query : 1 - 798 (798/798)
9 exons
identity = 0.990
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.920;
1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000020389
genome : 71,685,025 - 71,749,410 (64,386)
query : 1 - 904 (904/904)
10 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.920;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB173606
Representative transcript
genome : 71,749,607 - 71,755,977 (6,371)
query : 3 - 1,656 (1,654/1,671)
2 exons
identity = 0.977
5'(1.000;0.976)3'
coverage = 0.999
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000038406
(
BC018704
)
genome : 71,681,972 - 71,749,382 (67,411)
query : 1 - 2,885 (2,885/2,906)
11 exons
identity = 0.913
3'(0.884;0.988;0.984;0.982;1.000;1.000;1.000;
0.890;0.986;1.000;1.000)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000043257
(
AK123384
)
genome : 71,681,970 - 71,703,889 (21,920)
query : 3 - 2,311 (2,309/2,311)
4 exons
identity = 0.896
3'(0.882;0.976;0.982;0.988)5'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000027509
(
AL832597
)
genome : 71,749,573 - 71,829,513 (79,941)
query : 3 - 5,063 (5,061/5,082)
6 exons
identity = 0.913
5'(0.927)3'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
71675370-71755369 F +