bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XR_010861
Representative transcript
genome : 137,034,266 - 137,268,541 (234,276)
query : 1 - 4,601 (4,601/4,601)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000026978
Pan
sp. (Chimpanzee) : XM_519973
Pongo
sp. (Orangutan) : ENSPPYT00000022047
Mus
sp. (Mouse) : BC053930
Rattus
sp. (Rat) : XM_001068250
Canis
sp. (Dog) : XM_843165
Equus
sp. (Horse) : ENSECAT00000026725
Bos
sp. (Cow) : XM_600561
Monodelphis
sp. (Opossum) : XM_001381568
Danio
sp. (Zebrafish) : XM_689606
ENSMMUT00000038839
genome : 137,157,445 - 137,252,745 (95,301)
query : 1 - 5,418 (5,418/5,418)
8 exons
identity = 0.999
3'(1.000;0.999;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000006940
genome : 137,160,797 - 137,268,536 (107,740)
query : 1 - 2,747 (2,747/2,747)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000036824
Representative transcript
genome : 137,350,040 - 137,350,127 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000018946
(
AK094089
)
genome : 137,034,268 - 137,268,536 (234,269)
query : 1 - 2,462 (2,462/2,463)
6 exons
identity = 0.959
3'(0.935;0.955;0.993;0.972;0.972;0.984)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000242483
(
AB167739
)
genome : 137,034,269 - 137,268,542 (234,274)
query : 1 - 4,756 (4,756/4,756)
16 exons
identity = 0.944
3'(0.959;0.962;0.969;0.563;0.944;0.989;1.000;
0.989;0.979;0.964;0.993;0.995;0.972;0.966;
0.906;0.985)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
pHIT000015179
genome : 137,186,386 - 137,186,496 (111)
query : 1 - 111 (111/111)
1 exon
identity = 0.910
5'(0.910)3'
coverage = 1.000
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000451960
(
DQ585429
)
genome : 137,279,384 - 137,279,407 (24)
query : 1 - 24 (24/30)
1 exon
identity = 0.958
5'(0.958)3'
coverage = 0.800
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000028215
(
AL833303
)
genome : 137,341,583 - 137,347,796 (6,214)
query : 1 - 6,254 (6,254/6,272)
1 exon
identity = 0.922
3'(0.922)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000470808 (
ENST00000384850
)
genome : 137,350,040 - 137,350,127 (88)
query : 1 - 88 (88/88)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
136951403-137351402 F +