bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001101599
Representative transcript
genome : 24,782,291 - 24,793,440 (11,150)
query : 1 - 1,124 (1,124/1,124)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000288350
Pan
sp. (Chimpanzee) : XM_518273
Pongo
sp. (Orangutan) : ENSPPYT00000018934
Mus
sp. (Mouse) : AK131959
Rattus
sp. (Rat) : XM_001063272
Canis
sp. (Dog) : XM_535906
Equus
sp. (Horse) : ENSECAT00000009991
Bos
sp. (Cow) : BC109880
Monodelphis
sp. (Opossum) : XM_001375417
Gallus
sp. (Chicken) : AJ720138
Danio
sp. (Zebrafish) : BC049069
Oryzias
sp. (Medaka) : AJ608707
Tetraodon
sp. (Tetraodon) : GSTENT00033012001
Takifugu
sp. (Fugu) : SINFRUT00000164536
XM_001101696
genome : 24,782,294 - 24,793,440 (11,147)
query : 1 - 1,253 (1,253/1,253)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000024596
genome : 24,782,304 - 24,793,438 (11,135)
query : 1 - 1,241 (1,241/1,241)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000004959
(
AK021685
)
genome : 24,782,291 - 24,793,440 (11,150)
query : 3 - 1,133 (1,131/1,133)
7 exons
identity = 0.952
5'(0.872;0.974;0.962;0.979;0.964;0.964;0.965)3'
coverage = 0.998
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000288350
(
CR609155
)
genome : 24,782,311 - 24,793,412 (11,102)
query : 1 - 1,215 (1,215/1,215)
7 exons
identity = 0.950
5'(0.890;0.974;0.974;0.979;0.964;0.964;0.965)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
24779865-24795864 F +
MLT1B
AluY
(TTC)n
AluSx
AT_rich
AluSg/x
AluSx
L2
MER112
AluSx
L1M4
Kanga2_a
AluJo
L1MC5
MIR3
AT_rich
AluSx
AluJo
MIRm
L1MC4
MIR
AluSq
AluJb
MER3
L1ME1
L1ME1