bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XR_010990
Representative transcript
genome : 166,156,841 - 166,209,530 (52,690)
query : 1 - 3,271 (3,271/3,271)
22 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000436066
Pan
sp. (Chimpanzee) : XR_023540
Pongo
sp. (Orangutan) : ENSPPYT00000000368
Mus
sp. (Mouse) : BC054547
Rattus
sp. (Rat) : XM_001060716
Canis
sp. (Dog) : ENSCAFT00000015332
Equus
sp. (Horse) : ENSECAT00000010263
Bos
sp. (Cow) : BC120339
Monodelphis
sp. (Opossum) : ENSMODT00000037269
Gallus
sp. (Chicken) : CR352771
Danio
sp. (Zebrafish) : ENSDART00000032844
Oryzias
sp. (Medaka) : ENSORLT00000013408
Tetraodon
sp. (Tetraodon) : GSTENT00013920001
Takifugu
sp. (Fugu) : SINFRUT00000143344
Takifugu
sp. (Fugu) : SINFRUT00000151369
ENSMMUT00000024064
genome : 166,160,142 - 166,209,530 (49,389)
query : 1 - 3,201 (3,201/3,201)
20 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001098173
Representative transcript
genome : 166,219,325 - 166,235,467 (16,143)
query : 1 - 884 (884/884)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000044518
Pan
sp. (Chimpanzee) : XM_001144120
Pongo
sp. (Orangutan) : ENSPPYT00000000369
Mus
sp. (Mouse) : AY707859
Rattus
sp. (Rat) : AY196983
Canis
sp. (Dog) : XM_843391
Equus
sp. (Horse) : ENSECAT00000007565
Bos
sp. (Cow) : BC111610
Monodelphis
sp. (Opossum) : XM_001370802
Gallus
sp. (Chicken) : XR_026780
Danio
sp. (Zebrafish) : XM_001336349
Oryzias
sp. (Medaka) : ENSORLT00000016083
Tetraodon
sp. (Tetraodon) : GSTENT00029728001
Takifugu
sp. (Fugu) : SINFRUT00000180661
ENSMMUT00000024061
genome : 166,219,325 - 166,235,466 (16,142)
query : 1 - 883 (883/883)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001098073
genome : 166,219,435 - 166,235,467 (16,033)
query : 1 - 1,460 (1,460/1,460)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000024063
genome : 166,219,435 - 166,235,463 (16,029)
query : 1 - 1,456 (1,456/1,456)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000005162
genome : 166,237,103 - 166,243,324 (6,222)
query : 1 - 693 (693/693)
3 exons
identity = 0.987
5'(1.000;1.000;0.980)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000045110
genome : 166,237,103 - 166,243,324 (6,222)
query : 1 - 702 (702/702)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001098284
genome : 166,240,756 - 166,243,325 (2,570)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AY823262
Representative transcript
genome : 166,240,872 - 166,243,118 (2,247)
query : 1 - 267 (267/267)
2 exons
identity = 0.993
5'(1.000;0.992)3'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000274116
Pan
sp. (Chimpanzee) : ENSPTRT00000003428
Pongo
sp. (Orangutan) : ENSPPYT00000000371
Equus
sp. (Horse) : XM_001489036
Bos
sp. (Cow) : ENSBTAT00000028248
HIT000000686
(
AB023186
)
genome : 166,075,998 - 166,211,879 (135,882)
query : 1 - 5,047 (5,047/5,047)
23 exons
identity = 0.945
5'(0.955;0.884)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000021528
(
AK096673
)
genome : 166,211,939 - 166,214,227 (2,289)
query : 1 - 2,307 (2,307/2,307)
1 exon
identity = 0.940
5'(0.940)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000017321
(
AK092454
)
genome : 166,212,746 - 166,214,228 (1,483)
query : 2 - 1,501 (1,500/1,502)
1 exon
identity = 0.933
5'(0.933)3'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000044518
(
AK124645
)
genome : 166,219,327 - 166,235,466 (16,140)
query : 3 - 883 (881/883)
5 exons
identity = 0.948
5'(0.933;0.989;0.933;0.984;0.947)3'
coverage = 0.998
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000084483
(
AY117143
)
genome : 166,240,796 - 166,243,216 (2,421)
query : 1 - 438 (438/438)
2 exons
identity = 0.934
5'(0.990;0.917)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
166207396-166247395 F +