bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001116489
genome : 134,845,947 - 134,851,152 (5,206)
query : 1 - 2,366 (2,366/2,366)
8 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
AB171221
Representative transcript
genome : 134,846,041 - 134,850,667 (4,627)
query : 1 - 1,493 (1,493/1,509)
9 exons
identity = 0.994
3'(1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000259850
Pan
sp. (Chimpanzee) : XM_001164805
Pongo
sp. (Orangutan) : CR859438
Mus
sp. (Mouse) : AK139144
Rattus
sp. (Rat) : XM_001059976
Equus
sp. (Horse) : ENSECAT00000022658
Bos
sp. (Cow) : BC112862
Monodelphis
sp. (Opossum) : ENSMODT00000021472
Gallus
sp. (Chicken) : BX929680
Danio
sp. (Zebrafish) : XM_694084
Oryzias
sp. (Medaka) : ENSORLT00000020336
Takifugu
sp. (Fugu) : SINFRUT00000127469
ENSMMUT00000000128
genome : 134,846,042 - 134,850,735 (4,694)
query : 1 - 1,894 (1,894/1,894)
8 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000000130
genome : 134,846,104 - 134,850,738 (4,635)
query : 1 - 1,727 (1,727/1,727)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000000131
genome : 134,846,741 - 134,850,738 (3,998)
query : 1 - 739 (739/739)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XR_014193
genome : 134,851,573 - 134,887,250 (35,678)
query : 1 - 4,472 (4,472/4,472)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000000134
Representative transcript
genome : 134,851,577 - 134,887,344 (35,768)
query : 1 - 4,562 (4,562/4,562)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000000806
Pan
sp. (Chimpanzee) : ENSPTRT00000049017
Pongo
sp. (Orangutan) : ENSPPYT00000000869
Mus
sp. (Mouse) : AK129286
Rattus
sp. (Rat) : XM_001059906
Canis
sp. (Dog) : XM_547535
Equus
sp. (Horse) : XM_001500077
Bos
sp. (Cow) : BC134680
Monodelphis
sp. (Opossum) : XM_001374691
Gallus
sp. (Chicken) : XM_423228
Danio
sp. (Zebrafish) : BC096955
Oryzias
sp. (Medaka) : ENSORLT00000020331
Tetraodon
sp. (Tetraodon) : GSTENT00019522001
Takifugu
sp. (Fugu) : SINFRUT00000127468
ENSMMUT00000045708
genome : 134,852,094 - 134,887,344 (35,251)
query : 1 - 1,270 (1,270/1,270)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000045706
genome : 134,852,094 - 134,869,863 (17,770)
query : 1 - 1,830 (1,830/1,830)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001116519
genome : 134,887,431 - 134,898,198 (10,768)
query : 1 - 2,098 (2,098/2,098)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001116511
genome : 134,887,454 - 134,898,198 (10,745)
query : 1 - 2,263 (2,263/2,263)
5 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000000136
Representative transcript
genome : 134,887,467 - 134,898,342 (10,876)
query : 1 - 2,170 (2,170/2,170)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000270998
Pan
sp. (Chimpanzee) : ENSPTRT00000002674
Pongo
sp. (Orangutan) : ENSPPYT00000000868
Mus
sp. (Mouse) : AK009760
Rattus
sp. (Rat) : BC101913
Canis
sp. (Dog) : XM_849873
Equus
sp. (Horse) : ENSECAT00000001162
Bos
sp. (Cow) : BT020827
Monodelphis
sp. (Opossum) : XM_001374724
Tetraodon
sp. (Tetraodon) : CR690050
Tetraodon
sp. (Tetraodon) : GSTENT00019328001
Takifugu
sp. (Fugu) : SINFRUT00000182723
ENSMMUT00000000135
genome : 134,888,865 - 134,898,342 (9,478)
query : 1 - 2,427 (2,427/2,427)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000019998
(
AK095143
)
genome : 134,846,042 - 134,850,738 (4,697)
query : 1 - 1,906 (1,906/1,906)
8 exons
identity = 0.954
3'(0.960)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000020052
(
AK095197
)
genome : 134,846,042 - 134,850,735 (4,694)
query : 2 - 2,117 (2,116/2,117)
7 exons
identity = 0.954
3'(0.899)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000019201
(
AK094346
)
genome : 134,846,047 - 134,850,738 (4,692)
query : 2 - 1,822 (1,821/1,822)
7 exons
identity = 0.950
3'(0.960)5'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000011296
(
AK054682
)
genome : 134,846,048 - 134,850,738 (4,691)
query : 2 - 1,782 (1,781/1,782)
7 exons
identity = 0.948
3'(0.895)5'
coverage = 0.999
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000009669
(
AK026395
)
genome : 134,851,575 - 134,852,729 (1,155)
query : 1 - 1,150 (1,150/1,213)
1 exon
identity = 0.947
3'(0.947)5'
coverage = 0.993
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000009262
(
AK025988
)
genome : 134,851,576 - 134,852,948 (1,373)
query : 1 - 1,368 (1,368/1,384)
1 exon
identity = 0.952
3'(0.952)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000000806
(
AB029012
)
genome : 134,851,577 - 134,887,332 (35,756)
query : 19 - 4,563 (4,545/4,563)
22 exons
identity = 0.974
3'(0.953;0.978;1.000;1.000;0.994;1.000;1.000;
0.989;0.974;0.983;0.975;0.978;0.990;1.000;
0.976;0.975;0.967;0.978;0.994;0.992;0.990;
0.981)5'
coverage = 0.996
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000017050
(
AK092183
)
genome : 134,851,577 - 134,887,324 (35,748)
query : 1 - 1,753 (1,753/1,753)
10 exons
identity = 0.957
3'(0.934;0.855;0.976;0.975;0.967;0.978;0.994;
0.992;0.990;0.980)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000010758
(
AK027486
)
genome : 134,851,577 - 134,864,212 (12,636)
query : 2 - 2,349 (2,348/2,349)
9 exons
identity = 0.967
3'(0.951;0.978;1.000;1.000;0.988;1.000;1.000;
0.989;0.977)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000042507
(
AK122634
)
genome : 134,887,454 - 134,898,321 (10,868)
query : 1 - 1,898 (1,898/1,936)
5 exons
identity = 0.938
5'(0.985)3'
coverage = 0.980
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000270998
(
CR591803
)
genome : 134,887,455 - 134,898,321 (10,867)
query : 1 - 2,154 (2,154/2,173)
4 exons
identity = 0.943
5'(0.985)3'
coverage = 0.991
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000013430
(
AK056816
)
genome : 134,888,865 - 134,898,321 (9,457)
query : 1 - 2,393 (2,393/2,434)
3 exons
identity = 0.940
5'(0.928)3'
coverage = 0.983
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
134849460-134889459 F +